Pairwise Alignments

Query, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

 Score =  294 bits (753), Expect = 3e-84
 Identities = 162/373 (43%), Positives = 235/373 (63%), Gaps = 10/373 (2%)

Query: 2   IALARHLTPFVLAAGLLTAMPAQAFETKARHALVIDLDTDTVLLDKDADVPMPPSSMSKL 61
           I L+  L+    A+ ++T     A +  A+  +++D  +  VL +K+ D  + P+S++K+
Sbjct: 14  ITLSITLSSTAFASPIVTP---DAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKM 70

Query: 62  MTAYMLFERLKSGSLSLDDTFSVSENAWRKGGAASGGSTMFLNPGAQVKVHDLMRGIIIQ 121
           MT+Y++ + +K G++SL+D   +S+NAW K    S  S MF+  G  VKV DL RGIIIQ
Sbjct: 71  MTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDS--SKMFVEVGTTVKVSDLNRGIIIQ 128

Query: 122 SGNDACVVVAENLAGDEATFAAAMNRRAKELGLTNSHFVNATGLPDPEHYMTAHDLVLLA 181
           SGNDACV +AE++AG E  F   MN  A  LG+ NSHF N+ GL DP  Y T +DL LL 
Sbjct: 129 SGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLG 188

Query: 182 EHIIRDFPEFYEIYGETKFTYNGIVQHNRNPLLY-MNMGADGLKTGHTNIAGFGLTASAV 240
           + +IRD PE Y IY E KFTYNGI Q+NRN LL+  +M  DG+KTGHT+ AG+ L +SA 
Sbjct: 189 QALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSAT 248

Query: 241 QDGRRLLMVINGLQSNKERSEEAERLMSWGFRNFETVTLLKAGQPISDADVWMGEEETVP 300
           +   RL+ V+ G  +   R  E+++L+S+GFR FETV   KAG+   +  +WMG+++T+ 
Sbjct: 249 EGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIWMGDKDTIA 308

Query: 301 LVSVNDLKITLPRAARRDMVAKAVFETPIPAPIQAGDRIATLV--LTGPDMAKLEYPLVA 358
           L    D  +TLPR   +D+ A  V E  + AP++ GD + TL   L G D+A  +YPL+A
Sbjct: 309 LGVDKDTYVTLPRGQAKDLTASFVLEKQLKAPLKKGDIVGTLYYQLAGNDIA--QYPLLA 366

Query: 359 GRAVEQLSFFGRI 371
              V++ S F R+
Sbjct: 367 LEDVQEGSLFSRL 379