Pairwise Alignments

Query, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 392 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  267 bits (682), Expect = 4e-76
 Identities = 146/367 (39%), Positives = 224/367 (61%), Gaps = 10/367 (2%)

Query: 12  VLAAGLLTAMPA---QAFETKARHALVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLF 68
           +++A    A P     A    A+  +++D  T  ++ ++ A   + P+S++K+MT+Y++ 
Sbjct: 18  IMSASAFAAPPTVVPDAPSVAAKAYVLMDYHTGQIIAEEHAYEQLNPASLTKMMTSYVIG 77

Query: 69  ERLKSGSLSLDDTFSVSENAWRKGGAASGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACV 128
             +K G++S +D  ++++NAW K    S  S MF+  G  VK  DL RGIIIQSGNDACV
Sbjct: 78  HEMKVGNISPEDDVTITKNAWSKNFPDS--SKMFIEVGKTVKAADLNRGIIIQSGNDACV 135

Query: 129 VVAENLAGDEATFAAAMNRRAKELGLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDF 188
            +AE++AG E  F   MN  AK+LG+T+S+F N+ GL    H  TA+D+ +L   +IRD 
Sbjct: 136 AMAEHIAGTEDAFVDMMNSWAKQLGMTDSYFENSHGLDSDNHKTTAYDMAILGAALIRDV 195

Query: 189 PEFYEIYGETKFTYNGIVQHNRNPLLY-MNMGADGLKTGHTNIAGFGLTASAVQDGRRLL 247
           PE Y IY E +FT+NGI Q+NRN LL+  +M  DG+KTGHT+ AG+ L ASA QD  RL+
Sbjct: 196 PEEYRIYSEKEFTFNGIKQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVASATQDDMRLI 255

Query: 248 MVINGLQSNKERSEEAERLMSWGFRNFETVTLLKAGQPISDADVWMGEEETVPLVSVNDL 307
            V+ G  S   R  E+++L+S+GFR FETVT  KAG    +  +W G+ E+V L    D 
Sbjct: 256 SVVMGASSEASRKAESKKLLSYGFRFFETVTPYKAGDSFVNQQIWYGDRESVDLGVATDT 315

Query: 308 KITLPRAARRDMVAKAVFETPIPAPIQAGDRIATLV--LTGPDMAKLEYPLVAGRAVEQL 365
            +T+ R   +++ A      P+ AP+  G+ +  +   L G D+A  ++PLV  + V + 
Sbjct: 316 PLTIRRGKGKELQANFELTKPLEAPLAKGEVVGRVYFQLDGKDIA--QFPLVTLQEVNEG 373

Query: 366 SFFGRIL 372
           S+F +++
Sbjct: 374 SWFSKLM 380