Pairwise Alignments

Query, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 402 a.a., D-alanyl-D-alanine carboxypeptidase DacA from Rahnella sp. WP5

 Score =  257 bits (657), Expect = 4e-73
 Identities = 139/342 (40%), Positives = 205/342 (59%), Gaps = 3/342 (0%)

Query: 34  LVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFERLKSGSLSLDDTFSVSENAWRKGG 93
           ++ID ++  VL + +AD    P+S++K+MT+Y++ + +K+G +S  D  +V  +AW  G 
Sbjct: 49  ILIDYNSGKVLAEMNADARRDPASLTKMMTSYVIGQSIKAGKISPTDIVTVGPDAWATGN 108

Query: 94  AA-SGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVVAENLAGDEATFAAAMNRRAKEL 152
               G S MFL PG +V V +L RGII+QSGNDACV +A+++AG +  F A MN     L
Sbjct: 109 PVFKGSSLMFLKPGDRVPVSELNRGIILQSGNDACVAMADHVAGSQDAFVAIMNNYVNSL 168

Query: 153 GLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPEFYEIYGETKFTYNGIVQHNRNP 212
           GL N+HF    GL     Y +A D+ L+ + +IRD PE Y  Y E +FT+N I Q NRN 
Sbjct: 169 GLKNTHFGTVHGLDAAGQYSSARDMALIGQALIRDVPEEYATYKEKEFTFNNIRQMNRNG 228

Query: 213 LLYMN-MGADGLKTGHTNIAGFGLTASAVQDGRRLLMVINGLQSNKERSEEAERLMSWGF 271
           LL+ N +  DG+KTGHT+ AG+ L ASA +   RL+  + G  + K R  E+++L++WGF
Sbjct: 229 LLWDNSLNVDGIKTGHTDSAGYNLVASATEGQMRLISAVMGGHTYKGREVESKKLLTWGF 288

Query: 272 RNFETVTLLKAGQPISDADVWMGEEETVPLVSVNDLKITLPRAARRDMVAKAVFETP-IP 330
           R FETV+ LKAG+  +   VW G+ + V L    D  +T+PR   +D+ A  V  TP + 
Sbjct: 289 RFFETVSPLKAGKEFASEPVWFGDTDRVALGVEKDAYLTIPRGRMKDLKASYVLNTPELH 348

Query: 331 APIQAGDRIATLVLTGPDMAKLEYPLVAGRAVEQLSFFGRIL 372
           AP+Q    + ++          E PLV    V++  FFGRI+
Sbjct: 349 APLQKNQVVGSINFQLDGKTIDERPLVVMNEVKEGGFFGRIV 390