Pairwise Alignments

Query, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 393 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  331 bits (849), Expect = 2e-95
 Identities = 181/368 (49%), Positives = 248/368 (67%), Gaps = 10/368 (2%)

Query: 13  LAAGLLTAMPAQA-FETKARHALVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFERL 71
           LA GL  A  AQA FET+A  A V+D+ T TVLL+K+ADVP+PP+SMSKLMT YMLFE L
Sbjct: 11  LALGLGLAPAAQAAFETRAEAAYVVDVTTGTVLLEKNADVPLPPASMSKLMTLYMLFEAL 70

Query: 72  -KSGSLSLDDTFSVSENAWRKGGAASGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVV 130
            K+ +++LD TF VS  A  KGG     STMFL    +    DL++GII+QSGNDA VVV
Sbjct: 71  EKNPAVTLDTTFRVSARAMAKGG-----STMFLTERDRPTAEDLIKGIIVQSGNDATVVV 125

Query: 131 AENLAGDEATFAAAMNRRAKELGLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPE 190
           AE LAG E  F+  M  +   +GLT S F N++G PDP+H M+  DL +L + II D+PE
Sbjct: 126 AEGLAGTEEAFSRLMTEKGAAIGLTQSTFTNSSGWPDPQHRMSMRDLGILTQRIIEDYPE 185

Query: 191 FYEIYGETKFTYNGIV---QHNRNPLLYMNMGADGLKTGHTNIAGFGLTASAVQDGRRLL 247
           +Y  +  +++ ++G     + NRNPLL +++GADGLKTGHT  AG+GL  SA Q  RR++
Sbjct: 186 YYGYFAMSEWGFDGRAPQNRFNRNPLLKLDIGADGLKTGHTQEAGYGLVGSAQQGARRII 245

Query: 248 MVINGLQSNKERSEEAERLMSWGFRNFETVTLLKAGQPISDADVWMGEEETVPLVSVNDL 307
            VI GL++++ R+EE+ER++SW FR F    + +AG+ ++D  VW+GE ETV LVS  D+
Sbjct: 246 FVITGLETDRARAEESERIVSWAFRQFVEKDMAEAGRHLADLPVWVGEAETVGLVSPEDI 305

Query: 308 KITLPRAARRDMVAKAVFETPIPAPIQAGDRIATLVLTGPDMAKLEYPLVAGRAVEQLSF 367
           +  +P  A   +VA+   +TPI API AG ++A LV+TGP+M    YPLVA   V +   
Sbjct: 306 RPLVPMVASGSLVAEIEADTPIAAPITAGQQLAELVITGPEMEPQRYPLVAETDVAKGGA 365

Query: 368 FGRILASA 375
           + R+ A+A
Sbjct: 366 WVRMQAAA 373