Pairwise Alignments

Query, 374 a.a., DNA-directed DNA polymerase (NCBI) from Rhodospirillum rubrum S1H

Subject, 341 a.a., DNA polymerase III, delta'' subunit from Dechlorosoma suillum PS

 Score =  101 bits (252), Expect = 3e-26
 Identities = 85/257 (33%), Positives = 122/257 (47%), Gaps = 11/257 (4%)

Query: 42  HAWLISGPRGIGKATLAFRFARFALAGGLEGGEGGLFGALAPASLAMDPAHPVFRRVAAG 101
           HA L+ G RG+GK  LA  FA   L     G +G   G  +  +      HP FR V   
Sbjct: 23  HALLLIGQRGVGKFELARAFAAGLLCEA-PGMDGHACGQCSACNWLGQGNHPDFRLVQPA 81

Query: 102 SHGDLRVIERGLAEGTGGRRRG--EIVIGDVRDLGGFMRMTPSEGGWRVVIVDGAEDMNR 159
           +  D    E   A+   G+++   +I I  VR L  F+ +     G R+V++  AE MNR
Sbjct: 82  AMSD----EEAEADEETGKKKPSQQITIDQVRGLDDFLHVGTHRQGVRIVLLHPAEAMNR 137

Query: 160 NAANALLKGLEEPPGRALLLLVSHNPARLLPTIRSRCRRLALRPLEPAVLATLIERSLPE 219
           N ANALLK LEEP    L LLVS    RLLPTIRSRC+ + + PL P+  A     +  +
Sbjct: 138 NTANALLKSLEEPRPDTLFLLVSSEADRLLPTIRSRCQTVEV-PL-PSPQAATAWLAAQK 195

Query: 220 LAETERPGLIGLAEGSIGRAMDLAAMGGLALCREMIGLLATAPAFDVARLHGFADQAARD 279
           +++  R   + LA G+   A +LA  G  +L   ++G L      D        ++  + 
Sbjct: 196 VSDGGR--WLALAGGAPRLAAELAGSGQRSLLDALLGQLQKGRQLDPIAAAALIEKTLKA 253

Query: 280 DRAFTATAGLFPWWLAR 296
           D++   T      WL +
Sbjct: 254 DKSGALTMKRTVEWLQK 270