Pairwise Alignments

Query, 418 a.a., Small GTP-binding protein domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 9e-11
 Identities = 52/171 (30%), Positives = 75/171 (43%), Gaps = 10/171 (5%)

Query: 192 PVVALVGYTNSGKSTLFNRLT-AGGVLAKDMLFATLDPTMRSLDLPSGRKVILSDTVGFV 250
           PVVALVG  N GKSTLFNRLT     L  D    T D       L    + I+ DT G  
Sbjct: 3   PVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKL-GEHEFIVIDTGGID 61

Query: 251 SDLPHELVAAFRATLEEVKAADVIVHVRDIAGIDSDAQKADVEVVLREMELDERVESGLI 310
                      + +L  +  ADV++ + D     + A +A  + +        R+E   I
Sbjct: 62  GSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHL-------RRIEKPAI 114

Query: 311 EALNKIDLLDSERQAQLVEDTAGRDTLVPVSAVTGAGTDALLARIDARLAE 361
             +NK+D +D++  A       G D +  ++A  G G  AL+ R+    AE
Sbjct: 115 LVVNKVDGIDAD-AASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAE 164



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 24/190 (12%)

Query: 194 VALVGYTNSGKSTLFNR-LTAGGVLAKDMLFATLDPTMRSLDLP---SGRKVILSDTVGF 249
           +A++G  N GKSTL NR L    V+  DM   T D    S+ +P     R+ +L DT G 
Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRD----SIYIPMKRDEREYVLIDTAGV 263

Query: 250 -VSDLPHELVAAFRA--TLEEVKAADVIVHVRDIAGIDSDAQKADVEVVLREMELDERVE 306
                 +E V  F    TL+ ++ A+V++ V     +D+    +D ++ L    L+    
Sbjct: 264 RRRKRINETVEKFSVVKTLQAIEDANVVLLV-----VDARENISDQDLSLLGFALNS--G 316

Query: 307 SGLIEALNKIDLLDSERQAQLVEDTAGRDTLVP------VSAVTGAGTDALLARIDARLA 360
             ++ A+NK D L  + +  + ++   R   V       +SA+ G G   L   +     
Sbjct: 317 RSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYR 376

Query: 361 ESRIVLGLSI 370
            +   +G S+
Sbjct: 377 SATTRVGTSV 386