Pairwise Alignments

Query, 458 a.a., Potassium uptake protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 221 a.a., TrkA family potassium uptake protein from Methanococcus maripaludis S2

 Score =  103 bits (258), Expect = 4e-27
 Identities = 57/217 (26%), Positives = 120/217 (55%), Gaps = 3/217 (1%)

Query: 236 VLIFGGGNVGLFLAQALERDFPQVSAKIIENNKERAQHVAKTLDRTMVLLGDALNPEMLE 295
           +++ G G VG+ LA++L      +   I++ NK+  + VA  +D  +V+ GD    + LE
Sbjct: 3   IIVAGMGRVGISLAKSLSGKGHDLV--ILDQNKKTCEEVAGEID-ALVINGDCTKTKSLE 59

Query: 296 EAGVAQAETVVAVSNDDETNILASLLAKRYGCQRAITLINKSTYNSLVGTVGVDVVVNPR 355
            AG+  A+  +AV+ + E N+++ L+AK++   + I  +++  Y  +  ++G+ VV++P 
Sbjct: 60  NAGIEDADIFIAVTGNQEINLISGLIAKKFNVSKTIARVSEPDYKDVFESLGIGVVISPE 119

Query: 356 TITVSKILQHVRRGRIHSVHSLHEGFGELIEADALDTSPLVGKPLKDVNLPAGVLLGAIV 415
            +  + I + + R  +  +  +  G  E++E     TS +  K ++++      ++ AI 
Sbjct: 120 LVAANYIEKLIDRPGVVDLAIVGRGDAEILELIIPPTSKVADKKIRELGGTKDYVIIAIY 179

Query: 416 RGTQVISPRGTTVIQGGDRIILFASTAAIKKVEKMFS 452
            G ++  P G+T ++  DRI++ A T ++ +V K+FS
Sbjct: 180 EGNELKIPDGSTELKAYDRILILAKTDSLDEVRKVFS 216



 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 11/229 (4%)

Query: 1   MKVIVCGAGQVGFSIARYLAAENNDVTVVDQRPELIRSISDTLDVQALVGYASHPGVLEK 60
           M +IV G G+VG S+A+ L+ + +D+ ++DQ  +    ++  +D   + G  +    LE 
Sbjct: 1   MYIIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCEEVAGEIDALVINGDCTKTKSLEN 60

Query: 61  AGAEDADMLIAVTHADEVNMVACQVAHSLFNVPTKIARVRNQNYLQPHWANLFSRENMPI 120
           AG EDAD+ IAVT   E+N+++  +A   FNV   IARV      +P + ++F  E++ I
Sbjct: 61  AGIEDADIFIAVTGNQEINLISGLIAKK-FNVSKTIARVS-----EPDYKDVF--ESLGI 112

Query: 121 DVIISPEIEVARAIIRRLQVPGAMDIIPLAGDRVRLIGVRCTENTPVVHTPLRQLTQLFP 180
            V+ISPE+  A  I + +  PG +D+  +      ++ +     + V    +R+L     
Sbjct: 113 GVVISPELVAANYIEKLIDRPGVVDLAIVGRGDAEILELIIPPTSKVADKKIRELG---G 169

Query: 181 ELNIVVVGIVRNDRAIVPSAEDQMLPGDEVYFVVSTDRTQRALSAFGHE 229
             + V++ I   +   +P    ++   D +  +  TD        F  E
Sbjct: 170 TKDYVIIAIYEGNELKIPDGSTELKAYDRILILAKTDSLDEVRKVFSSE 218