Pairwise Alignments

Query, 481 a.a., Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) from Rhodospirillum rubrum S1H

Subject, 464 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  300 bits (769), Expect = 5e-86
 Identities = 184/469 (39%), Positives = 261/469 (55%), Gaps = 32/469 (6%)

Query: 5   LVADDDRGIRTVLSQALTRAGHEVRSTGTASTLWSWVTDGQGDLVITDVIMPDENGLDLI 64
           L+ DD+  IR +L   L R   + RS          +     DL +TD+ +PD +GL+L+
Sbjct: 27  LIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELV 86

Query: 65  PRIKKIRPDLRIVVMSAQNTLLTAVKATERGAFEYLPKPFDLTEVVNVVRRALSLPRGNP 124
             I++  P L + +++A  +L TA+ A + GAF++L KP DL  +  +V  AL L R   
Sbjct: 87  QYIQQQHPQLPVAMITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRL-RAPA 145

Query: 125 TEGDHASEEDERLPLIGRSPAMQEIYRTLARLMNTDLTVMINGESGTGKELVARALHDYG 184
           TE    S       L+G SP M+ + + + +L  +   V I+GESG+GKELVAR +H+ G
Sbjct: 146 TEAPVDSR------LLGGSPPMKVLRKQIGKLARSQAPVYISGESGSGKELVARLIHEQG 199

Query: 185 KRRNGSFVAVNMGAIPRELIESELFGHEKGAFTGAHARSAGRFEQADGGTLFLDEIGDMP 244
            R   +FV VN GAIP EL+ESE FGH+KG+F+GA     G F+ A GGTLFLDE+ D+P
Sbjct: 200 PRAEKTFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAASGGTLFLDEVADLP 259

Query: 245 LEAQTRLLRVLQESEYTTVGGRQTLRANVRIIAATHRDLRQLIHQGLFREDLFYRLNVVP 304
           L  Q +LLR +QE     VGG Q +  +VRI+ ATH+DL   +  G FR+DL+YRLNV+ 
Sbjct: 260 LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIE 319

Query: 305 LRLPPLRERVEDIPELTRHFLHAVAEHDGLPPKVLEAPAMERLKKHRWSGNVRELENLVR 364
           LR+PPLRER EDI  L    L  +A+  G     L   A+ +L+ +R+ GNVRELEN++ 
Sbjct: 320 LRVPPLRERREDIRLLADAMLRRLAQECGDSIAHLHPEALAKLESYRFPGNVRELENMLE 379

Query: 365 RLAALYSQEVIGVEVIEAELSSSAPPILDEGDESAEGLSTKVERHLRHYFEAHGEALPPA 424
           R   L      G E+   +L  +  P   E  E++      +E HL              
Sbjct: 380 RAYTLCD----GEEIKAGDLRLADSPGSSENGEASLAQIDNLEDHL-------------- 421

Query: 425 GLHERISREVERPLISLCLEATRGNQIKAAQLLGLNRNTLRKKIRDLDI 473
                   E+ER LI   LE TR N+  AAQ LGL   ++R +++ L +
Sbjct: 422 -------EEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGL 463