Pairwise Alignments

Query, 481 a.a., Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) from Rhodospirillum rubrum S1H

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  369 bits (947), Expect = e-106
 Identities = 204/471 (43%), Positives = 301/471 (63%), Gaps = 14/471 (2%)

Query: 4   ILVADDDRGIRTVLSQALTRAGHEVRSTGTASTLWSWVTDGQGDLVITDVIMPDENGLDL 63
           + V DDD  IR V+ + L+ A  +  +   A ++   +     D++++D+ MP  +G+ L
Sbjct: 6   VWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIAL 65

Query: 64  IPRIKKIRPDLRIVVMSAQNTLLTAVKATERGAFEYLPKPFDLTEVVNVVRRALSLPRGN 123
           + ++ +  P+L +++M+A + L  AV A ++GAFEYLPKPFD+ E + +V RA++  +  
Sbjct: 66  LNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQ 125

Query: 124 PTEGDHASEEDERLPLIGRSPAMQEIYRTLARLMNTDLTVMINGESGTGKELVARALHDY 183
                  SE      +IG +PAMQE++R + RL  + ++V+INGESGTGKELVA ALH +
Sbjct: 126 RKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHALHRH 185

Query: 184 GKRRNGSFVAVNMGAIPRELIESELFGHEKGAFTGAHARSAGRFEQADGGTLFLDEIGDM 243
             R    F+A+NM AIP++LIESELFGHEKGAFTGA+    GRFEQA+GGTLFLDEIGDM
Sbjct: 186 SPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDEIGDM 245

Query: 244 PLEAQTRLLRVLQESEYTTVGGRQTLRANVRIIAATHRDLRQLIHQGLFREDLFYRLNVV 303
           PL+ QTRLLRVL + ++  VGG   ++ +VRI+AATH++L +L+HQG FREDLF+RLNV+
Sbjct: 246 PLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVI 305

Query: 304 PLRLPPLRERVEDIPELTRHFLHAVAEHDGLPPKVLEAPAMERLKKHRWSGNVRELENLV 363
            + +P LRER +DI +LT+HFL   A+  G+  K L    ++ L K  W GNVR+LEN+ 
Sbjct: 306 RIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMC 365

Query: 364 RRLAALYSQEVIGVEVIEAELSSSAPPILDEGDESAEGLSTKVERHLRHYFEAHGEALPP 423
           R L  + S    G EV+ ++L S    +L E   S        ++ L    E   ++   
Sbjct: 366 RWLTVMAS----GSEVLPSDLPSE---LLSERKASHFDNDISWQKQL----ETWAKSALA 414

Query: 424 AGLHERIS---REVERPLISLCLEATRGNQIKAAQLLGLNRNTLRKKIRDL 471
           +G  E ++    E ER L+   L  T G++ +AA++LG  RNTL +K+++L
Sbjct: 415 SGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKEL 465