Pairwise Alignments

Query, 481 a.a., Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) from Rhodospirillum rubrum S1H

Subject, 469 a.a., nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) from Shewanella loihica PV-4

 Score =  377 bits (967), Expect = e-109
 Identities = 209/474 (44%), Positives = 302/474 (63%), Gaps = 14/474 (2%)

Query: 4   ILVADDDRGIRTVLSQALTRAGHEVRSTGTASTLWSWVTDGQGDLVITDVIMPDENGLDL 63
           + V DDD  IR V+ +AL  A     S   A +LW  +   Q  ++I+D+ MP  +GL L
Sbjct: 5   VWVLDDDSSIRWVVERALKGAKISCASFAAAESLWQALEQTQPQVIISDIRMPGTDGLTL 64

Query: 64  IPRIKKIRPDLRIVVMSAQNTLLTAVKATERGAFEYLPKPFDLTEVVNVVRRALSLPRGN 123
           + R++   P + +++M+A + L +AV A + GAFEYLPKPFD+ E + +V RALS  +  
Sbjct: 65  LDRLQLHYPHIPVIIMTAHSDLDSAVSAYQAGAFEYLPKPFDIDEAIGLVERALSHAKEQ 124

Query: 124 PTEGDHASEEDERLP-LIGRSPAMQEIYRTLARLMNTDLTVMINGESGTGKELVARALHD 182
             +    S+ + + P +IG +PAMQE++R + RL  + ++V+ING+SGTGKELVA ALH 
Sbjct: 125 SPKV--ISQPEVKAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGQSGTGKELVAGALHK 182

Query: 183 YGKRRNGSFVAVNMGAIPRELIESELFGHEKGAFTGAHARSAGRFEQADGGTLFLDEIGD 242
           +  R++  F+A+NM AIP+ELIESELFGHEKGAFTGA     GRFEQADGGTLFLDEIGD
Sbjct: 183 HSPRKDKPFIALNMAAIPKELIESELFGHEKGAFTGAANVRQGRFEQADGGTLFLDEIGD 242

Query: 243 MPLEAQTRLLRVLQESEYTTVGGRQTLRANVRIIAATHRDLRQLIHQGLFREDLFYRLNV 302
           MPL+ QTRLLRVL + ++  +GG   ++ +VRIIAATH++L  L+ +G FREDLF+RLNV
Sbjct: 243 MPLDVQTRLLRVLADGQFYRIGGHSPVQVDVRIIAATHQNLESLVAKGDFREDLFHRLNV 302

Query: 303 VPLRLPPLRERVEDIPELTRHFLHAVAEHDGLPPKVLEAPAMERLKKHRWSGNVRELENL 362
           + + LPPL +R EDIP+L RHFL   A+   + PK+L     + L    W GNVR+LEN 
Sbjct: 303 IRVHLPPLSQRREDIPQLARHFLATAAKEISVEPKILTKATADTLASLPWPGNVRQLENT 362

Query: 363 VRRLAALYSQEVIGVEVIEAELSSSAPPILDEGDESAEGLSTKVERHLRHYFE---AHGE 419
            R L  + S    G E++  +L        +  D S +  S   +  L  + +   + GE
Sbjct: 363 CRWLMVMAS----GQEILPQDLPPELLTPSNSHDSSPQAGSGGWQEALTQWIDQRLSEGE 418

Query: 420 ALPPAGLHERISREVERPLISLCLEATRGNQIKAAQLLGLNRNTLRKKIRDLDI 473
               + L  +I    E+ L+   L+ T+G++ +AA+ LG  RNTL +K+++L++
Sbjct: 419 ----SDLLTQIQPAFEKILLETALKHTKGHKQEAAKRLGWGRNTLTRKLKELEM 468