Pairwise Alignments

Query, 362 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) from Rhodospirillum rubrum S1H

Subject, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

 Score = 87.0 bits (214), Expect = 6e-22
 Identities = 89/308 (28%), Positives = 139/308 (45%), Gaps = 35/308 (11%)

Query: 14  IMLAPMAGVTDSP---FRRLAHDYGCPLSWTEMVASRELLRERARGVDPRLGGGAEAGRA 70
           + +APM   TD     F RL       L +TEMV +  ++  R   +       A     
Sbjct: 7   LSVAPMLDWTDRHCRYFHRLLSAQ--TLLYTEMVTTGAIIHGRGDFL-------AYNQEE 57

Query: 71  GPFAVQLAGCDPLIMAEAARRVEGAGAELIDINMGCPVRKVVGGLGGSALMRDLPLAARI 130
            P A+Q  G +P  +A  A+  +  G + I++N+GCP  +V  G  G+ LM +  L A  
Sbjct: 58  HPVALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAEC 117

Query: 131 LEAVVGAVTLPVSLKMRLGWDDASRNAVE-----LARLAESAGISRLTVHGR-------- 177
           + A+   V +PV++K R+G DD  +++ E     +A +AE  G  + T+H R        
Sbjct: 118 VAAMRAVVDIPVTVKTRIGIDD--QDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLS 175

Query: 178 TRAQMYDGRADWPAIGLVKRAV-SLPVIANGDVTNLSEAREILAVTGADGVMIGRAALGA 236
            +        D+P    +KR    L +  NG V +L EA+  L +   DGVMIGR A   
Sbjct: 176 PKENREIPPLDYPRAYQIKRDFPHLTIAVNGGVKSLEEAK--LHLQHLDGVMIGREAYQN 233

Query: 237 PWLPGAIARAIAAGTRETPPPALAERAAVMAAHLEGLLACHGLERGLKTSRKHMGWYART 296
           P+L   + + I     ETP    ++    M  ++E  L+  G   G  T  +HM    + 
Sbjct: 234 PYLLAEVDQQIFG--LETPVKKRSQVIHEMMPYIERELS-QGTHLGHMT--RHMLGLFQN 288

Query: 297 MPQGADFR 304
           MP    +R
Sbjct: 289 MPGARQWR 296