Pairwise Alignments

Query, 362 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) from Rhodospirillum rubrum S1H

Subject, 343 a.a., putative TIM-barrel protein, nifR3 family from Dechlorosoma suillum PS

 Score =  266 bits (680), Expect = 6e-76
 Identities = 147/329 (44%), Positives = 196/329 (59%), Gaps = 6/329 (1%)

Query: 14  IMLAPMAGVTDSPFRRLAHDYGCPLSWTEMVASRELLRERARGVDPRLGGGAEAGRAGPF 73
           + +APMAGVTD PFR+L    G  L+ +EMV S  LL     G           G   P 
Sbjct: 12  LFVAPMAGVTDRPFRQLCKTLGAGLAVSEMVTSNSLLY----GSKKTQRRANHEGEVAPI 67

Query: 74  AVQLAGCDPLIMAEAARRVEGAGAELIDINMGCPVRKVVGGLGGSALMRDLPLAARILEA 133
           +VQ+AG DP +MAEAA+     GA++IDINMGCP +KV   + GSALM+D  L  RILEA
Sbjct: 68  SVQIAGADPAMMAEAAKYNVDNGAQIIDINMGCPAKKVCNVMAGSALMQDEVLVGRILEA 127

Query: 134 VVGAVT-LPVSLKMRLGWDDASRNAVELARLAESAGISRLTVHGRTRAQMYDGRADWPAI 192
           VVGAV   PV+LK R GW+  ++NA  +AR+AE++GI  + +HGRTRA  Y G A++  I
Sbjct: 128 VVGAVPDTPVTLKFRTGWNRLNKNAPTIARIAEASGIRAVAIHGRTRADQYTGEAEYETI 187

Query: 193 GLVKRAVSLPVIANGDVTNLSEAREILAVTGADGVMIGRAALGAPWLPGAIARAIAAGTR 252
            LVK  + +PVIANGD+T   +AR +L VTGADGVMIGRAA G PW+   I   +  G  
Sbjct: 188 ALVKSQIGIPVIANGDITTPEKARHVLEVTGADGVMIGRAAQGRPWIFREIEHFLKTG-E 246

Query: 253 ETPPPALAERAAVMAAHLEGLLACHGLERGLKTSRKHMGWYARTMPQGADFRAAYMAAAD 312
             PPP + E   ++  HL+ L A +G+E G+K +RKH+ WY + +   A FR       +
Sbjct: 247 HLPPPRVEEIHRILQEHLQDLYAFYGIETGVKIARKHISWYTKGLVGSAAFRKTMNQLME 306

Query: 313 AGAARRVLNHFTALWQSAPPSASQESRQR 341
             A +  +N F A    A      E+ Q+
Sbjct: 307 LDAQQAAVNEFFASLAQAGEHLKYEAPQQ 335