Pairwise Alignments

Query, 261 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 281 a.a., aliphatic sulfonate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  105 bits (261), Expect = 1e-27
 Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 29/237 (12%)

Query: 23  ALIGLWHLAFVLAGARPYLLPSPWQTAQALIGRWPTI------------LPHAGTTAL-E 69
           A + LW  A       P + PS      AL   W  I            L  +GT  +  
Sbjct: 44  AFLALWQAASTAGWINPAVFPSVGAILSAL---WTGISGGALLDDIAISLQRSGTAFVGA 100

Query: 70  IVLGLGLGTLLGALSALTIALSPLMRRMLLPLLVISQAIPVFAIAPLLVLWLGYGLASKV 129
           +VL + LG L+G + A+  AL P+++        + +     A+ P+ +L LG G ASKV
Sbjct: 101 VVLAIPLGLLMGQVRAIENALDPVLQ--------LFRQTSALALYPVFILLLGLGEASKV 152

Query: 130 AMATLVIYFPVTTAFLDGLRRTEPGWLDLARTMGASPLSTLLRIRLPAALPALASGLRVA 189
            +      FP+  + + G++  +   +++AR  GAS L+   R+ LP A+P++  GLR++
Sbjct: 153 FVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIFVGLRLS 212

Query: 190 TAVAPIGAVVGEWVGSSAGLGYLMLHANARMQIDLMFAALFVLTVFSLGL---YALV 243
              A +  +  E +G++ G+G+ +++A    QI LMFAA+F+L    LGL   YALV
Sbjct: 213 ATTALLLLIASEMIGANKGIGFQVMNAQYNFQIPLMFAAIFILA--GLGLVSNYALV 267