Pairwise Alignments

Query, 565 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

Subject, 972 a.a., multisubunit potassium/proton antiporter, PhaA subunit / multisubunit potassium/proton antiporter, PhaB subunit from Pseudomonas syringae pv. syringae B728a

 Score =  153 bits (386), Expect = 3e-41
 Identities = 145/479 (30%), Positives = 217/479 (45%), Gaps = 52/479 (10%)

Query: 10  LLMILGGLMLPLLPKRAQDPLMVFLPLATL-----WAVW--QIADGPMMLVRFLDLVLEP 62
           LL  +G  +   LP  A++       L  L      A+W  QIADG ++   +  L   P
Sbjct: 8   LLPFIGSCLAAFLPHNARNAESFLAGLIALIGAVQMALWFPQIADGGVIREEYFWL---P 64

Query: 63  VRG-DAVGRL--FASVFSLMAFA-GGLFALKQ----------PRVLERAAALVYAGGAVG 108
             G + V R+  FA +FS++    G L +L            PR    A  L + G  +G
Sbjct: 65  SLGMNFVLRIDGFAWLFSMLVLGIGALVSLYARYYMSPDDPVPRFF--AFFLAFMGAMLG 122

Query: 109 CALAGDLISLFVFWEIMAVASTLVIWSSDQPAAAKAGMRYALMHL-FGGAVLMAG--IAG 165
             ++G+LI +  FWE+ ++ S L+I      A A+ G   ALM    GG  L+AG  I G
Sbjct: 123 LVMSGNLIQIVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLALLAGMMILG 182

Query: 166 HAIGGGSLD--------VTAMTLDSPANWLILIGVLVNAGAPPFSAWIADAYPEGSFSGS 217
           H  G   LD        + A  L      LILIG L  +   PF  W+  A    +   +
Sbjct: 183 HVAGSYDLDRVLASGDAIRAHALYPVLLTLILIGALTKSAQFPFHFWLPHAMAAPTPVSA 242

Query: 218 VFLSAFTTKTAVMVLIKGFP---GTELLIWI----GLAMVFYGILYALLENDMRRILSYS 270
              SA   K  V ++ + +P   GTE   WI    G   +  G   A+ +ND++ +L+YS
Sbjct: 243 YLHSATMVKAGVFLMARMWPALSGTEQWFWIVSGAGACTLILGAYAAIFQNDLKGLLAYS 302

Query: 271 IVNQVGFMVCAVGIGTDMALNGAAAHAFAHILYKALLLMSAGSVLMMTGGKRKCTELGGL 330
            ++ +G +   +G+ + +A   A  H   H  +KA L M+AG ++    G R    L GL
Sbjct: 303 TISHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAG-IIDHESGTRDIRRLSGL 361

Query: 331 YRSMPITTVCGIIGALAISAFPFTSGFVSKSM-IAQGAADQHLVWVWALLQ--AASAGVF 387
            R +P T    ++ + +++  P  +GF+SK M  A+        WV   L   A  AG+F
Sbjct: 362 IRLLPYTATLAMVASASMAGVPLLNGFLSKEMFFAETVFISATAWVEIALPVIATIAGIF 421

Query: 388 LHA-GIKFPWFVFF---QKDSGLRPADPPASMRAAMILLAAACIGLGVFPGALYALLPA 442
             A  ++F   VFF    KD    P +PP  MRA + LL   C+ +G+FP    A L A
Sbjct: 422 SVAYSLRFTVDVFFGPAAKDLPHLPHEPPRWMRAPVELLVLTCLVVGIFPAQSVAPLLA 480