Pairwise Alignments

Query, 565 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

Subject, 617 a.a., NADH dehydrogenase subunit L from Pseudomonas syringae pv. syringae B728a

 Score =  101 bits (252), Expect = 8e-26
 Identities = 121/487 (24%), Positives = 206/487 (42%), Gaps = 55/487 (11%)

Query: 36  LATLWAVWQIADGP-------MMLVRFLD---------LVLEPVRGDAVGRLFASVFSLM 79
           + T W +WQ    P        +L R++D         L L+ +    +G +    F + 
Sbjct: 43  IVTAWVIWQFNVAPPEGGHYSQVLWRWMDVDGFQPNFALYLDGLSVTMLGVVVGVGFLIH 102

Query: 80  AFAGGLFALKQPRVLERAAALVYAGGAVGCALAGDLISLFVFWEIMAVASTLVI-WSSDQ 138
            FA      +       +   ++    +   L  +L+ ++  WE + + S L+I +    
Sbjct: 103 LFASWYMRGEAGYSRFFSYTNLFIASMLFLILGDNLLFIYFGWEGVGLCSYLLIGFYYSN 162

Query: 139 PAAAKAGMRYALMHLFGGAVLMAGIAGHAIGGGSLDVTAMTLDSPAN------WLILIGV 192
                A ++  ++   G   +  G+       G+L+V  + + +P +      W++L  +
Sbjct: 163 RNNGNAALKAFIVTRIGDVFMAIGLFILFQQLGTLNVQELLVRAPEHFKVGDFWIVLATL 222

Query: 193 LVNAGAP------PFSAWIADAYPEGSFSGSVFLSAFTTKTAVMVLIKGFPGTELL---- 242
           ++  GA       P   W+ADA   G    S  + A T  TA + LI    G   L    
Sbjct: 223 MLLGGAVGKSAQLPLQTWLADAMA-GPTPVSALIHAATMVTAGVYLIARTHGLFALAPDI 281

Query: 243 -----IWIGLAMVFYGILYALLENDMRRILSYSIVNQVGFMVCAVGIGTDMALNGAAAHA 297
                I  G+ +V  G   AL++ D++RIL+YS ++Q+G+M  A+G+G   A  GA  H 
Sbjct: 282 LHLVGIVGGVTLVLAGFA-ALVQTDIKRILAYSTMSQIGYMFLALGVG---AWEGAIFHL 337

Query: 298 FAHILYKALLLMSAGSVLMMTGGKRKCTELGGLYRSMPITTVCGIIGALAISAFP-FTSG 356
             H  +KALL +++G+V++    ++   ++GGL++ +P+     I+G  A+SA P  T+G
Sbjct: 338 MTHAFFKALLFLASGAVIVACHHEQNIFKMGGLWKKLPLAYASFIVGGAALSALPLLTAG 397

Query: 357 FVSKSMIAQGAADQHLVWVWALLQAASAGVFLHAGIKFPWFVFFQKDSGLRPADPPASMR 416
           F SK  I   A          LL A   G F+ +   + + + F    G    +  A   
Sbjct: 398 FYSKDEILWEAFASGNN---GLLYAGLVGAFMTS--LYTFRLIFIAFHGEAKTEAHAGHG 452

Query: 417 AAMILLAAACIGLGVFPGALY-----ALLPAPTDYQPYTADH-LVSQFQLLLFAGLAFFV 470
            A  L  +  I L  F GAL       +LP    +    A H L      +  AG+    
Sbjct: 453 IAHWLPLSVLIVLSTFIGALITPPLAGVLPQSVGHAGGEAKHSLEIASGAIALAGILLAA 512

Query: 471 LLPLMKR 477
           LL L KR
Sbjct: 513 LLFLGKR 519