Pairwise Alignments

Query, 868 a.a., MscS Mechanosensitive ion channel (NCBI) from Rhodospirillum rubrum S1H

Subject, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score = 85.9 bits (211), Expect = 4e-21
 Identities = 57/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 595 SQTGMDAGVRHSLTAVLGYIGLVAAAALAVGTMGID--LTNIALIAGALSVGIGFGLQNI 652
           SQ G  A  R   T V  Y  ++ A  +    +G+   L  + +  G   + +GF  Q +
Sbjct: 122 SQEGKFAEYRLKAT-VFHYSAMIIAFGIVFQMLGLTSKLGTLLVAGGITGIILGFASQTV 180

Query: 653 VNNFVSGLIILVERPVKVGDWVIIGSHEGLVKRISFRATELETFTQASVVIPNAEILSSP 712
           V NF+SG+ +  ++P+K+GD V IG++ G+V  I   +T + T+    V IPN ++ +S 
Sbjct: 181 VANFISGIFLYFDKPLKIGDSVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSE 240

Query: 713 FTNLTLRNRLGRIDVSVLVIMNSDTRKVRDLLLEIARAHPQVLTLPAPWVVLKAFADTGL 772
             N   +    R+D+ V +    D ++  D++ +I      VL  P   + +    ++ +
Sbjct: 241 IVN-NKKYPARRVDIVVGIAYKEDAQRAMDIISKILENMTYVLVEPEFQIFVNDLGNSSV 299

Query: 773 EFEVRSYTSNVMNRGTIASDMRLEIDRRFREEGVIMPAPLRPIITP 818
           +  V+++T +      +  ++   I + F +E V +P P R +  P
Sbjct: 300 DISVKAWTPS-EKWYDVKMELVKNIKKEFDKEKVEIPFPQRTVWFP 344