Pairwise Alignments

Query, 868 a.a., MscS Mechanosensitive ion channel (NCBI) from Rhodospirillum rubrum S1H

Subject, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis JJ

 Score =  102 bits (253), Expect = 4e-26
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 4/253 (1%)

Query: 560 SVRISIVDIAVGILVFLVAMAITRVAQGTLQRKVLSQTGMDAGVRHSLTAVLGYIGLVAA 619
           S+ I+++ I   IL+ ++     R+    L+     ++ +   V   +  +   I  V  
Sbjct: 9   SMSINLILILKAILILVLGYFAVRIVSSILENGA-KKSKIPELVSEFVIKLFSAILYVFV 67

Query: 620 AALAVGTMGIDLTNIAL-IAGALSVGIGFGLQNIVNNFVSGLIILVERPVKVGDWVIIGS 678
             LAVG  G++   I L ++ +L + +GFGLQ+ + N  SGL I V +P+   + V IG 
Sbjct: 68  ILLAVGVFGVETGPIILGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDETVQIGG 127

Query: 679 HEGLVKRISFRATELETFTQASVVIPNAEILSSPFTNLTLRNRLGRIDVSVLVIMNSDTR 738
             G +  +   AT+L T     + IPN  +  SP TN T R  L R+DV+V V    +  
Sbjct: 128 ITGKIVEVGIMATKLLTPDNVVITIPNKLVWGSPITNYT-RMDLRRVDVAVGVSYGENLD 186

Query: 739 KVRDLLLEIARAHPQVLTLPAPWVVLKAFADTGLEFEVRSYTSNVMNRGTIASDMRLEID 798
                 LE+   HP+VL  PAP VV+    ++ ++ ++R++T      G +  D+   I 
Sbjct: 187 NALSKALELISEHPKVLKDPAPAVVVTGLGESSVDLQLRAWTKTGDYWG-VKGDLTKGIY 245

Query: 799 RRFREEGVIMPAP 811
            ++ +EG+ +P P
Sbjct: 246 EKYGKEGIEIPFP 258