Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 510 a.a., NADH dehydrogenase subunit M from Pseudomonas syringae pv. syringae B728a

 Score =  340 bits (873), Expect = 5e-98
 Identities = 179/478 (37%), Positives = 288/478 (60%), Gaps = 21/478 (4%)

Query: 36  RNVALLTTGFTFLVSLGLW----FGFDP---AQSGFQFVEKVSWLPDYGINYQMGVDGIS 88
           R +ALLT     ++ L LW    FG+ P   A   +       W+  +GI+  + +DG+S
Sbjct: 29  RWIALLTMTLELVLGLWLWATGNFGYAPVPGADPTWTLEFHHPWITRFGIDVHLALDGLS 88

Query: 89  VLFVLLSTFLTPLCILASWTSITKRVKEYMVAFLVLETMMVGMFCALDFVVFYVFFEGVL 148
           +L +LL+  L  L +L SW  I ++V  + +  + +   +VG+F A+D  +F+ F+E +L
Sbjct: 89  LLMILLTGLLGVLSVLCSWKEIQRKVGFFHLNLMWILGGVVGVFLAIDLFMFFFFWEMML 148

Query: 149 IPMFLIIGIWGGGR------RVYASFKFFLYTLAGSVLMMVAMLAMY-IEAGTTDIPT-- 199
           +PM+ +I +WG         R+YA+ KFF++T A  ++M+VA+L +  +    T + T  
Sbjct: 149 VPMYFLIALWGHSSSDGKKTRIYAATKFFIFTQASGLIMLVAILGLVLVHFNQTGVITFA 208

Query: 200 ---LMSHGFPAAMQTWLWLAMFASFAVKVPMWPVHTWLPDAHVEAPTAGSVILAGVLLKM 256
              L+        +  L L  F +FAVK+P+ P+H+WLPDAH +APTAGSV LAG+LLK 
Sbjct: 209 YADLLKTKLAPGTEYILMLGFFIAFAVKLPVVPLHSWLPDAHAQAPTAGSVDLAGILLKT 268

Query: 257 GAYGFLRFSIPMLPLASADFAPFIFALSVIGVIYTSLVALVQEDMKKLIAYSSIAHMAFV 316
            AYG LRF++P+ P ASA+FAP    L ++G+ Y + +A  Q D+K+LIA+SS++HM FV
Sbjct: 269 AAYGLLRFALPLFPNASAEFAPIAMTLGLVGIFYGAFLAFAQTDIKRLIAFSSVSHMGFV 328

Query: 317 TAGIFAVNQMSVEGALYQMLSHGVVSGALFLCVGVVYDRLHTREISRYGGLAKNMPRYAL 376
             GI++ +Q +++G L QM++HG+ + ALF+  G +Y+RLHTR++   GGL   +     
Sbjct: 329 LIGIYSGSQQALQGVLIQMIAHGLSAAALFILSGQLYERLHTRDMREMGGLWSRIAYIPA 388

Query: 377 VFMVFMMASIGLPGTGGFIGEFLIMMGVFQISTWVALFIATGVILGAAYMLYLYRRVIFG 436
           + + F  AS+GLPGTG F+GEFLI++G F  S W+     +G++ G+ Y L +  R  FG
Sbjct: 389 ISLFFAAASLGLPGTGNFVGEFLILLGSFASSPWITAIATSGLVFGSVYSLIMIHRAYFG 448

Query: 437 KLEKEDLKGLLDLNRREVAIFAPLLVLVLWMGVYPSTFLDFMHTSVADLVSTYETALT 494
             + +++  L  ++ RE+ +   L VL++ +GV+P  FLD    ++  +     TA T
Sbjct: 449 PSKSDEV--LKGMDGREMIMVLGLAVLLVVLGVFPQPFLDTSAATMHGVQQWLGTAFT 504