Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 480 a.a., NADH-quinone oxidoreductase subunit M from Rhodopseudomonas palustris CGA009

 Score =  272 bits (696), Expect = 2e-77
 Identities = 150/444 (33%), Positives = 245/444 (55%), Gaps = 12/444 (2%)

Query: 46  TFLVSLGLWFGFDPAQSGFQFVEKVS--WLPDYGINYQMGVDGISVLFVLLSTFLTPLCI 103
           TF + L L        +  ++ +KVS  W+P +GI+    +DG+S   + L+  L  + +
Sbjct: 34  TFALMLVLLVAVVATGAEGRWYDKVSYPWVPSFGISLDFAIDGLSATMIALAAGLGIISV 93

Query: 104 LASWTSITKRVKEYMVAFLVLETMMVGMFCALDFVVFYVFFEGVLIPMFLIIGIWGGGRR 163
           +ASW+ I  +   +  +        VG+F + D ++F  F+E +L+P F +I +WG G +
Sbjct: 94  MASWSEIRTQSGLFHASLCWTVAATVGVFLSFDLLIFAFFWEAMLVPAFTLIAVWGHGDK 153

Query: 164 VYASFKFFLYTLAGSVLMMVAMLAMYIEAG--TTDIPTLMSHGFPAAMQTWLWLAMFASF 221
             A+ KF ++       ++ A  A+   A   T     L        +Q W+ L    +F
Sbjct: 154 EGAALKFLIFNAVAGFGLLAASFALAAMADHMTFSAFELAEMKLSTPVQVWMLLGFSLAF 213

Query: 222 AVKVPMWPVHTWLPDAHVEAPTAGSVILAGVLLKMGAYGFLRFSIPMLPLASADFAPFIF 281
            VK+ + P H WLP+AH  APTAGS++LAG+LLK GAYG  RF+  + P   A  AP+  
Sbjct: 214 MVKLSVPPFHAWLPEAHTLAPTAGSILLAGLLLKTGAYGLFRFAPMLFPDGLAAVAPYGI 273

Query: 282 ALSVIGVIYTSLVALVQEDMKKLIAYSSIAHMAFVTAGIFAVNQMSVEGALYQMLSHGVV 341
           AL   G +Y  LVA  Q D K+L+AY+SIAHM+ V  GI A    ++ GA  +M++H   
Sbjct: 274 ALGAAGALYGGLVACGQNDAKRLVAYTSIAHMSIVLMGISAGVHYALAGAAVEMIAHSFS 333

Query: 342 SGALFLCVGVVYDRLHTREISRYGGLAKNMPRYALVFMVFMMASIGLPGTGGFIGEFLIM 401
           + ALFL +G +Y+R HTR++ + GGL +  P++A  F +F  A + LPGT  F+GE L++
Sbjct: 334 ASALFLLIGALYERTHTRDLRQLGGLQQTAPKFAAAFALFCSALLALPGTANFVGEALVV 393

Query: 402 MGVFQISTWVALFIATGVILGAAYMLYLYRRVIFGKLEKEDLKGLLDLNRREVAIFAPLL 461
           +G+FQ++   AL   + +++   Y   L + ++FG  + +    L D+  RE   + P+L
Sbjct: 394 VGIFQVNWVFALLALSTLVVSVIYATRLLKGLVFGLPQPK--PPLADMTWRE---YWPIL 448

Query: 462 VL---VLWMGVYPSTFLDFMHTSV 482
           V+    L +G+YP + L  +  ++
Sbjct: 449 VMGIGTLIIGLYPQSLLALLEPAI 472