Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 505 a.a., NADH-quinone oxidoreductase subunit M from Rhodopseudomonas palustris CGA009

 Score =  639 bits (1647), Expect = 0.0
 Identities = 315/491 (64%), Positives = 380/491 (77%), Gaps = 1/491 (0%)

Query: 5   PLLSIITFLPLVGAVFILTVKGEEAVVARNARNVALLTTGFTFLVSLGLWFGFDPAQSGF 64
           P+LS++TFLP++GA  +   +GE+    RNAR ++L TT  TF VSL L + FDPA  GF
Sbjct: 9   PVLSVVTFLPVLGAALVYLARGEDEAARRNARWISLWTTLITFAVSLLLVWHFDPANPGF 68

Query: 65  QFVEKVSWLPDYGINYQMGVDGISVLFVLLSTFLTPLCILASWTSITKRVKEYMVAFLVL 124
           QFVEK  WL +  I Y MG+DGIS+  V+L+T + P CI+ASW S+T RV+EYM+AFL+L
Sbjct: 69  QFVEKAPWLGNT-ITYHMGLDGISLPLVILTTAIMPFCIIASWRSVTVRVREYMIAFLIL 127

Query: 125 ETMMVGMFCALDFVVFYVFFEGVLIPMFLIIGIWGGGRRVYASFKFFLYTLAGSVLMMVA 184
           ET+M+G F ALD V+FY+FFEG LIPMFLIIGIWGG RRVYASFKFFLYTL GSVLM++A
Sbjct: 128 ETLMIGTFSALDLVLFYLFFEGGLIPMFLIIGIWGGPRRVYASFKFFLYTLLGSVLMLLA 187

Query: 185 MLAMYIEAGTTDIPTLMSHGFPAAMQTWLWLAMFASFAVKVPMWPVHTWLPDAHVEAPTA 244
           ++A+Y  AGTTDIPTLM    P+ +QTW WLA FASFAVK+PMWPVHTWLPDAHVEAPTA
Sbjct: 188 IMALYWNAGTTDIPTLMRTSVPSGLQTWAWLAFFASFAVKMPMWPVHTWLPDAHVEAPTA 247

Query: 245 GSVILAGVLLKMGAYGFLRFSIPMLPLASADFAPFIFALSVIGVIYTSLVALVQEDMKKL 304
           GSV+LA +LLKMG YGFLRFS+PM P ASA FAP I+ LSVI +IYTSLVAL+QED+KKL
Sbjct: 248 GSVVLAAILLKMGGYGFLRFSLPMFPDASAYFAPLIYTLSVIAIIYTSLVALMQEDIKKL 307

Query: 305 IAYSSIAHMAFVTAGIFAVNQMSVEGALYQMLSHGVVSGALFLCVGVVYDRLHTREISRY 364
           IAYSS+AHM FVT GIFA     V GA++QM+SHG+VSGALFLCVGVVYDR+HTREI+ Y
Sbjct: 308 IAYSSVAHMGFVTMGIFAGTTQGVAGAVFQMVSHGIVSGALFLCVGVVYDRMHTREIAAY 367

Query: 365 GGLAKNMPRYALVFMVFMMASIGLPGTGGFIGEFLIMMGVFQISTWVALFIATGVILGAA 424
           GGL   MP YALVFMVF MA++GLPGT GF+GEFL ++G F+++   A    TGVIL A 
Sbjct: 368 GGLVNRMPLYALVFMVFTMANVGLPGTSGFVGEFLTLLGTFRVNIPTATLATTGVILSAG 427

Query: 425 YMLYLYRRVIFGKLEKEDLKGLLDLNRREVAIFAPLLVLVLWMGVYPSTFLDFMHTSVAD 484
           Y L+LYR+V+FG + K  L  + DL  RE  + APLLVL +  G YP   LD    SV  
Sbjct: 428 YALWLYRKVVFGAMTKPALASIKDLTWREGLMMAPLLVLTILFGFYPKPVLDMSAASVQQ 487

Query: 485 LVSTYETALTA 495
           LV+ Y  A+TA
Sbjct: 488 LVNNYAAAVTA 498