Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 487 a.a., NADH-quinone oxidoreductase subunit M from Pedobacter sp. GW460-11-11-14-LB5

 Score =  363 bits (932), Expect = e-105
 Identities = 185/486 (38%), Positives = 294/486 (60%), Gaps = 19/486 (3%)

Query: 7   LSIITFLPLVGAVFILTVKGEEAVVARNARNVALLTTGFTFLVSLGLWF----GFDPAQS 62
           L ++ FLPLVGA+          V A   ++  +++T F+ +VSLGL       F P  S
Sbjct: 4   LLLLIFLPLVGAI----------VTAFAGKSAKIVSTVFS-VVSLGLALVIACNFIPNAS 52

Query: 63  GFQFVEKVSWLPDYGINYQMGVDGISVLFVLLSTFLTPLCILASWTSITKRVKEYMVAFL 122
             QF   + W+ D GIN+  G+DGIS+L VLL+  L P+ IL+S+    K    +    L
Sbjct: 53  T-QFEVNLPWIADLGINFHAGIDGISMLVVLLTNLLVPIIILSSYNHEYKNPAAFYALIL 111

Query: 123 VLETMMVGMFCALDFVVFYVFFEGVLIPMFLIIGIWGGGRRVYASFKFFLYTLAGSVLMM 182
            ++  ++ +F ALD  +FY+ +E  LIP++ I  IWGG  R+  + KFF+YT+AGS+ M+
Sbjct: 112 FMQCGLLLVFTALDAFLFYIGWEAALIPIYFICAIWGGKDRISINMKFFVYTIAGSLFML 171

Query: 183 VAMLAMYIE--AGTTDIPTLMSHGFPAAMQTWLWLAMFASFAVKVPMWPVHTWLPDAHVE 240
           + ++ +Y++  A   DI    +    +A Q W++ A F +FA+K+P++P HTW PD +  
Sbjct: 172 MGIIYLYLQNPAHNFDIQAFYALNLDSAQQGWIFWAFFIAFAIKMPIFPFHTWQPDTYTA 231

Query: 241 APTAGSVILAGVLLKMGAYGFLRFSIPMLPLASADFAPFIFALSVIGVIYTSLVALVQED 300
           APT G+++L+GV+LKMG YG +R+ +P++P    D+      LS+IG++Y S++A  Q+D
Sbjct: 232 APTQGTMLLSGVMLKMGIYGVIRWLLPIVPAGVHDWGQVAIVLSIIGIVYASIIAFTQKD 291

Query: 301 MKKLIAYSSIAHMAFVTAGIFAVNQMSVEGALYQMLSHGVVSGALFLCVGVVYDRLHTRE 360
            K+L+AYSSIAH+  ++AGIFA NQ  ++GA+ QMLSHG+    LF  + +++ R+ T +
Sbjct: 292 AKRLVAYSSIAHVGLISAGIFAFNQQGMQGAMVQMLSHGINVVGLFFVLDIIFSRVKTNK 351

Query: 361 ISRYGGLAKNMPRYALVFMVFMMASIGLPGTGGFIGEFLIMMGVFQISTWVALFIATGVI 420
           I   GG+AK  P+ AL F++ ++ ++ LPGT GFIGEFL++MGV+    W A      +I
Sbjct: 352 IEELGGIAKVAPQLALTFLIIVLGTVALPGTNGFIGEFLLLMGVYNYGIWAAAIAGLTII 411

Query: 421 LGAAYMLYLYRRVIFGKLEKEDLKGLLDLNRREVAIFAPLLVLVLWMGVYPSTFLDFMHT 480
            GA YML +Y+ V+ G+     +    D+   E  +   +  L++ +G+YP   L     
Sbjct: 412 FGAVYMLRMYQNVMLGETNSLTIT-FTDIKGTEKLVLYIICALIIVLGIYPKPVLHLTEA 470

Query: 481 SVADLV 486
           SV  L+
Sbjct: 471 SVQHLL 476