Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 519 a.a., proton-translocating NADH-quinone oxidoreductase, chain M (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  457 bits (1176), Expect = e-133
 Identities = 236/487 (48%), Positives = 325/487 (66%), Gaps = 15/487 (3%)

Query: 4   LPLLSIITFLPLVGAVFILTVKGEEAVVARNARNVALLTTGFTFLVSLGL-W--FGFDPA 60
           +P+LSI+ FLPLV A  +L ++ +E V     R V+L  +    LV L   W    F+P 
Sbjct: 5   IPVLSILIFLPLVAAALLLPLRDDETV-----RRVSLAAS----LVGLAAGWPLIAFNP- 54

Query: 61  QSGFQFVEKVSWLPDYGINYQMGVDGISVLFVLLSTFLTPLCILASWTSITKRVKEYMVA 120
            +GFQFVE+++W+  +G+ Y + VDGIS+L V L+ F  PLC+L SWT I KRVKE+ + 
Sbjct: 55  DAGFQFVERMTWVARWGLEYHLAVDGISILMVWLTLFTLPLCVLCSWTYIGKRVKEFHIC 114

Query: 121 FLVLETMMVGMFCALDFVVFYVFFEGVLIPMFLIIGIWGGGRRVYASFKFFLYTLAGSVL 180
            L++ +  +G+F ++D V+FYVF+E +LIPM+L+I +WGG  R YAS KFFLYTLAGS L
Sbjct: 115 LLLMTSACIGVFTSMDLVLFYVFWEAMLIPMYLLIAVWGGAERRYASIKFFLYTLAGSTL 174

Query: 181 MMVAMLAMYIEAGTTDIPTLMSHGFPAAMQTWLWLAMFASFAVKVPMWPVHTWLPDAHVE 240
           ++VA++A  I  GT  IP LM   F    Q W +LAM  +FA+KVPM+P HTWLP AHV+
Sbjct: 175 LLVAIVAFRIAGGTFSIPDLMQQTFGFRFQYWAFLAMALAFAIKVPMFPFHTWLPAAHVQ 234

Query: 241 APTAGSVILAGVLLKMGAYGFLRFSIPMLPLASADFAPFIFALSVIGVIYTSLVALVQED 300
           AP+AGSVILA VLLKMG YGFLRF +P+ P AS  FAP +  +SV+ ++Y   VAL Q D
Sbjct: 235 APSAGSVILAAVLLKMGTYGFLRFCLPLTPEASVHFAPLMIGVSVVSILYGGAVALGQTD 294

Query: 301 MKKLIAYSSIAHMAFVTAGIFAVNQMSVEGALYQMLSHGVVSGALFLCVGVVYDRLHTRE 360
           +KKL+AYSS+AHM FVT GIF   +  V+GAL QML+HG+V+GALF+ +G +Y+R H+RE
Sbjct: 295 IKKLVAYSSVAHMGFVTLGIFLFQKSGVQGALLQMLNHGIVTGALFMMIGAMYERSHSRE 354

Query: 361 ISRYGGLAKNMPRYALVFMVFMMASIGLPGTGGFIGEFLIMMGVFQISTWVALFIATGVI 420
           ++   G+ K +P +   + ++ +AS G PGT GF+GE L+ +  FQ S  V   I  G +
Sbjct: 355 VADNMGMGKYLPAFMFFWGLYALASFGFPGTNGFVGEVLVFVAAFQQSLTVGALIVPGAL 414

Query: 421 LGAAYMLYLYRRVIFGKLEKEDLKGLLDLNRREVAIFAPLLVLVLWMGVYPSTFLDFMHT 480
           L AAYM  +  R+ +G       K   DLNRRE A      VLVLW+G+ P+ FL  +  
Sbjct: 415 LAAAYMFRVSLRMAWG--SPSTAKTWNDLNRREWAYLLLPAVLVLWIGLAPAPFLRLIDP 472

Query: 481 SVADLVS 487
           S+  L++
Sbjct: 473 SIDRLLA 479