Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 515 a.a., proton-translocating NADH-quinone oxidoreductase, chain M (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  639 bits (1647), Expect = 0.0
 Identities = 320/507 (63%), Positives = 392/507 (77%), Gaps = 17/507 (3%)

Query: 6   LLSIITFLPLVGAVFI-LTVKGEEAVVARNARNVALLTTGFTFLVSLGLWFGFDPAQSGF 64
           LLSIITF+P V A+ + L ++G++    RNA+ +AL+ T  TF++SL L  GFDP  +GF
Sbjct: 4   LLSIITFIPAVAALILALFLRGDDEAARRNAKWLALIATSVTFILSLFLLAGFDPQDTGF 63

Query: 65  QFVEKVSWLPDYGINYQMGVDGISVLFVLLSTFLTPLCILASWTSITKRVKEYMVAFLVL 124
           QFVE+  W+   G+ Y+MGVDGIS+LFV+L+TFL P+ I + WT +  RVKEYM+AFLVL
Sbjct: 64  QFVEERPWV--LGLTYKMGVDGISILFVMLTTFLMPITIASCWT-VETRVKEYMIAFLVL 120

Query: 125 ETMMVGMFCALDFVVFYVFFEGVLIPMFLIIGIWGGGRRVYASFKFFLYTLAGSVLMMVA 184
           ET+M+G+F ALD V+FY+FFE  LIPMFLIIGIWGG  R+YASFKFFLYT  GSVLM+VA
Sbjct: 121 ETLMIGVFTALDLVLFYLFFEAGLIPMFLIIGIWGGANRIYASFKFFLYTFLGSVLMLVA 180

Query: 185 MLAMYIEAGTTDIPTLMSHGFPAA------------MQTWLWLAMFASFAVKVPMWPVHT 232
           M+AMY++AGTTDIPTL++H F               MQ  LWLA FASFAVK+PMWPVHT
Sbjct: 181 MVAMYVDAGTTDIPTLLTHQFGTTTIEVLGIHILGGMQVLLWLAFFASFAVKMPMWPVHT 240

Query: 233 WLPDAHVEAPTAGSVILAGVLLKMGAYGFLRFSIPMLPLASADFAPFIFALSVIGVIYTS 292
           WLPDAHV+APTAGSV+LA +LLKMG YGFLRFS+PM P+AS   AP +  LS I ++YTS
Sbjct: 241 WLPDAHVQAPTAGSVVLAAILLKMGGYGFLRFSLPMFPVASDIMAPLVLWLSAIAIVYTS 300

Query: 293 LVALVQEDMKKLIAYSSIAHMAFVTAGIFAVNQMSVEGALYQMLSHGVVSGALFLCVGVV 352
           LVALVQ DMKKLIAYSS+AHM FVT GIFA NQ  V+GA++QM+SHG +SGALFLCVGV+
Sbjct: 301 LVALVQTDMKKLIAYSSVAHMGFVTMGIFAANQQGVDGAIFQMISHGFISGALFLCVGVI 360

Query: 353 YDRLHTREISRYGGLAKNMPRYALVFMVFMMASIGLPGTGGFIGEFLIMMGVFQISTWVA 412
           YDR+HTREI  YGGL   MP YALVFM+F MA++GLPGT GF+GEFL ++GVFQ++TWVA
Sbjct: 361 YDRMHTREIDAYGGLVNRMPAYALVFMLFTMANVGLPGTSGFVGEFLTLVGVFQVNTWVA 420

Query: 413 LFIATGVILGAAYMLYLYRRVIFGKLEKEDLKGLLDLNRREVAIFAPLLVLVLWMGVYPS 472
              ATGVIL A Y L+LYRRV+FG L KE LK + D+  RE AIFAPL+V+ L +GVYPS
Sbjct: 421 FVAATGVILSAGYALWLYRRVVFGDLIKESLKTINDMTLRERAIFAPLIVMTLLLGVYPS 480

Query: 473 TFLDFMHTSVADLVSTYETALTAAGTP 499
              D +  SV  +++ Y TA  AA  P
Sbjct: 481 LVTDIIGPSVEGMLTQY-TAQVAAFVP 506