Pairwise Alignments

Query, 162 a.a., NADH-quinone oxidoreductase, chain I (NCBI) from Rhodospirillum rubrum S1H

Subject, 65 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 50.1 bits (118), Expect = 7e-12
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 56  YANGEERCIACKLCEAICPAQAITIEAEPRTDGSRRTTRYDIDMTKCIYCGFCEEACPVD 115
           Y   E+ CIAC  C  +CP QAI+  A+ +           ID  KC  CG C + CPV+
Sbjct: 3   YKVNEDECIACGACVPVCPVQAISENADGKA---------VIDCAKCNDCGDCSDVCPVE 53

Query: 116 AI 117
            I
Sbjct: 54  CI 55



 Score = 31.2 bits (69), Expect = 3e-06
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 95  YDIDMTKCIYCGFCEEACPVDAIVE 119
           Y ++  +CI CG C   CPV AI E
Sbjct: 3   YKVNEDECIACGACVPVCPVQAISE 27