Pairwise Alignments

Query, 162 a.a., NADH-quinone oxidoreductase, chain I (NCBI) from Rhodospirillum rubrum S1H

Subject, 52 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 43.1 bits (100), Expect = 7e-10
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 11/59 (18%)

Query: 61  ERCIACKLCEAICPAQAITIEAEPRTDGSRRTTRYDIDMTKCIYCGFCEEACPVDAIVE 119
           ++C+ C  C   CP  AI++  +            +IDM  C  C  C++ CP+DAI E
Sbjct: 5   DKCVGCAGCVPFCPVGAISVFGKA-----------EIDMEMCTNCAVCKDYCPLDAISE 52



 Score = 24.6 bits (52), Expect = 3e-04
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 99  MTKCIYCGFCEEACPVDAI 117
           + KC+ C  C   CPV AI
Sbjct: 4   LDKCVGCAGCVPFCPVGAI 22