Pairwise Alignments

Query, 337 a.a., Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 335 a.a., NADH dehydrogenase subunit H from Pseudomonas syringae pv. syringae B728a

 Score =  296 bits (757), Expect = 6e-85
 Identities = 145/319 (45%), Positives = 213/319 (66%), Gaps = 3/319 (0%)

Query: 12  AIIIVLQCLAIILPMLGAIAYLTYAERKVIGAMQMRKGPNVVGPFGLLQPLADGVKLFLK 71
           AII V++ + ++L ++   A L++ ER+++G  Q R GPN VGPFG+ Q  AD +K+F K
Sbjct: 11  AIIAVVKAIVVLLAVVVCGALLSFIERRLLGWWQDRYGPNRVGPFGMFQIAADMLKMFFK 70

Query: 72  ETIIPTGANRAVFIIAPLMTFILALIAWAVIPFDAGWVVADINVGVLYLFAVSGLGVYGI 131
           E   P  A++ +F +AP++     LIA+AVIP    W VAD+N+G+L+ FA++GL VY +
Sbjct: 71  EDWTPPFADKVIFTLAPVVAMSALLIAFAVIPITPTWGVADLNIGLLFFFAMAGLSVYAV 130

Query: 132 IMAGWASNSKYAFLGGLRSAAQMVSYEVAMGLIIIAVILSAGSMNLSDIVEAQRQGVWYF 191
           + AGW+SN+K+A LG LR++AQ VSYEV MGL ++ +++  GS N+ DIVE Q Q +W+ 
Sbjct: 131 LFAGWSSNNKFALLGSLRASAQTVSYEVFMGLALMGIVVQVGSFNMRDIVEYQAQNLWFI 190

Query: 192 IPHFPMFVMFLVSILAETNRAPFDLPEAEAELVSGYNVEYSAMPFALFFLGEYGNMILMS 251
           IP F  F  F ++ +A T+R PFD PEAE EL  GY++EY+ M + +FF+GEY  +IL+S
Sbjct: 191 IPQFFGFCTFFIAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGMFFVGEYIGIILIS 250

Query: 252 GITAILFLGGWLPPVDIAPFNWIPGIIWFFLKIALILFVFLWVRATFPRYRYDQLMRLGW 311
            +   LF GGW  P DI P        WF LK A  + +F+ +RA+ PR RYDQ+M   W
Sbjct: 251 ALLVTLFFGGWHGPFDILP---SLAFFWFALKTAFFIMLFILLRASIPRPRYDQVMDFSW 307

Query: 312 KVFLPGSLIWVVLTAGFLV 330
           K  LP +LI +++TA  ++
Sbjct: 308 KFCLPLTLINLLVTAAIVL 326