Pairwise Alignments

Query, 1483 a.a., Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI) from Rhodospirillum rubrum S1H

Subject, 1155 a.a., Na+/proline symporter from Pseudomonas stutzeri RCH2

 Score =  210 bits (534), Expect = 8e-58
 Identities = 174/560 (31%), Positives = 272/560 (48%), Gaps = 65/560 (11%)

Query: 735  EELTALNGQLHETLERQRTTSNDLQNVLYSTDVATLFLDTALNIRFFTPATKLLFRVIPG 794
            +++  + G+  E L+  R     LQ  + +       +D +L +  +      LF    G
Sbjct: 614  DDVVRIVGEASEVLQFNRAL---LQGAIENITQGISVVDQSLRLVAWNHRYLELFEYPDG 670

Query: 795  --DIGRPLADLSPLVADDALLGDAAKVLKTMTPIEREIEARSGSWYLRRILPYRTQ---D 849
               IGRP+AD+    A+  L G          P + +       +++R+   + ++    
Sbjct: 671  LVYIGRPIADIIRYNAERGLCG----------PGDPDTHVAKRLYWMRQGRAHTSERLFP 720

Query: 850  NG--VE---------GVVITFADITERRWAA----DARE--------------------- 873
            NG  VE         G V++F+DIT  R A     DA E                     
Sbjct: 721  NGRVVELIGNPMPGGGFVMSFSDITAYREAERALKDANEGLEQRVSERTQELSQLNQALI 780

Query: 874  VAKRQAQIANMAKSRFLAVASHDLRQPLQTLTLLQGLLAKKVEGV--QSRVLLARMDETL 931
             AK  A+ AN +K+RFLA  SHDL QPL    L    L+ +   +  +++ L+  +D +L
Sbjct: 781  EAKSTAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQQSALPREAQELVQHLDSSL 840

Query: 932  GAMSSMLNVLLDINQIEVGTVEAERVVFPINDLFDRVREELAYQARAKKLDWSVVSCGLS 991
             +   ++  LLDI+++E G V  +R  FP+  LFD +  E    AR + +++ V    L 
Sbjct: 841  RSAEDLITDLLDISRLESGRVTPDRNPFPLATLFDTLGTEFTVLAREQGVNFRVHGSKLR 900

Query: 992  VTSDPRLLEQMIRNLLANALKYTKQGKVLLGCRRRSGSLSIEVWDSGIGIPPGELEAIFD 1051
            V SD RLL ++++N L NA +Y K G+V+LG RR+  SL +EVWD G GIP  +L+ IF+
Sbjct: 901  VDSDIRLLRRVLQNFLTNAFRYAK-GRVVLGVRRQGASLRLEVWDRGPGIPQDKLKVIFE 959

Query: 1052 EFHQVETPAQGQGRGLGLGLSIVRRLGDLLGHPIGVRSRLGKGSVFTINVAIAPAAAEKP 1111
            EF ++++      +GLGLGL+I   L  +L HP+ VRS  GKGSVF++ V IA A ++ P
Sbjct: 960  EFKRLDSHQTRAEKGLGLGLAIADGLCHVLEHPLEVRSWPGKGSVFSVTVPIARALSQ-P 1018

Query: 1112 SLPARRGAAEVKVDADGQRTG-EILIIEDDPDVRDLLDLLLKGEGHRTVAVAEGGQAVAL 1170
                +RG  +         TG ++L I+++  +   +  LL   G +    +   +  AL
Sbjct: 1019 RPVVKRGEPQ-----HSALTGTQVLCIDNEDSILVGMSSLLTRWGCQVWTASNRDECEAL 1073

Query: 1171 AEGGSIRPDLILADYNLPNGVNGLGVSATLRDVLDRPIPVVILTGDISTRTLHDIARHRC 1230
                 IRP L+L DY+L  G  G  + A LR  L  P+P V+++ D     +  I     
Sbjct: 1074 L-AEDIRPQLVLVDYHLDEGQTGTELMAWLRTRLGEPVPGVVISADGRPELIAAIHASGL 1132

Query: 1231 VKLNKPVKPGELTQTIARLL 1250
              L KPVKP  L   ++R L
Sbjct: 1133 DFLAKPVKPAALRALMSRHL 1152