Pairwise Alignments

Query, 1483 a.a., Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI) from Rhodospirillum rubrum S1H

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (437), Expect = 2e-46
 Identities = 142/539 (26%), Positives = 246/539 (45%), Gaps = 27/539 (5%)

Query: 852  VEGVVITFADITERRWAADAREVAKRQAQIANMAKSRFLAVASHDLRQPLQTLTLLQGLL 911
            V G+V    D+TER+   D    AK  A   + AK  FLA  SH++R P+  +  +  L 
Sbjct: 573  VNGIVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLA 632

Query: 912  AKKVEGVQSRVLLARMDETLGAMSSMLNVLLDINQIEVGTVEAERVVFPINDLFDRVREE 971
                     R  + R++E+   +  ++N +LD +++E G +  ER+ F ++D+ D V   
Sbjct: 633  LNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAV 692

Query: 972  LAYQARAKKLDWSV---VSCGLSVTSDPRLLEQMIRNLLANALKYTKQGKVLLGCR---- 1024
            ++ +A+ K +++ +       L +  DP  L Q++ NL  NA+K+T QG+++L  R    
Sbjct: 693  VSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQL 752

Query: 1025 -RRSGSLSIEVWDSGIGIPPGELEAIFDEFHQVETPAQGQGRGLGLGLSIVRRLGDLLGH 1083
              +  +L   V D+GIGI   +L+ +FD F Q +     Q  G GLGLSI ++L +L+G 
Sbjct: 753  NEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGG 812

Query: 1084 PIGVRSRLGKGSVFTINVAIAPAAAEKPSLPARRGAAEVKVDADGQRTGEILIIEDDPDV 1143
             I V S  GKGS F  +V      A+           ++     G     +L+++D+   
Sbjct: 813  QITVHSEEGKGSTFEFSVVCGLQDAK---------MRDISQPVHGLADKRVLVVDDNDSA 863

Query: 1144 RDLLDLLLKGEGHRTVAVAEGGQAVALAEGGSIRPDLILADYNLPNGVNGLGVSATLRDV 1203
            R +LD LL       V V+ G +  AL+E      D++  D+N+P G+NG+ +   ++ +
Sbjct: 864  RHILDSLLTAMRFNVVTVSNGFE--ALSEIQQKPFDMLFVDWNMP-GMNGIELLTRVKTL 920

Query: 1204 LDRPIPVVILTGDISTRTLHDIARHRCVK--LNKPVKPGELTQTIARLLPPPVGPAAARL 1261
              R      L          D    + V   + KPV P  L   I  +    +     + 
Sbjct: 921  GLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNLLDAI--VTSYGIEHVRHKT 978

Query: 1262 PAPPPSPGPGGPLPLIYLVDDDASLRDSLRALLEDDGLKVEDYESSEAFLAAYRPGGGEA 1321
                 +  P      + LV+D+   ++    LL+D GL V      +  L        + 
Sbjct: 979  NEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFD- 1037

Query: 1322 CLLIDAYLPGMSGLDLLERLKKENR--LLPAIVITGYSEVAMAVQAMKAGASDFIEKPV 1378
             +L+D  +P M G+   E ++   R   LP + +T  +      + ++AG +D + KP+
Sbjct: 1038 LVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPI 1096



 Score = 30.4 bits (67), Expect = 0.001
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)

Query: 1277 IYLVDDDASLRDSLRALLEDDGLKVEDYESSEAFLAAYRPGGGEACLLIDAYLPGMSGLD 1336
            + +VDD+ S R  L +LL      V    +    L+  +    +  L +D  +PGM+G++
Sbjct: 854  VLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDM-LFVDWNMPGMNGIE 912

Query: 1337 LLERLKKENRL--LPAIVITGYS-EVAMAVQAMKAGASDFIEKPVGRTELLISI 1387
            LL R+K       + + ++T Y  E+ +  +  K      I KPV  + LL +I
Sbjct: 913  LLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKL-VDALIVKPVNPSNLLDAI 965