Pairwise Alignments

Query, 1483 a.a., Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI) from Rhodospirillum rubrum S1H

Subject, 1175 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  179 bits (454), Expect = 2e-48
 Identities = 140/462 (30%), Positives = 226/462 (48%), Gaps = 62/462 (13%)

Query: 841  RILPYRTQDNGVEGVVITFADIT----------------ERRWAADAREVAKR--QAQIA 882
            ++L  R Q     G V TF DIT                E+R  +  RE+AK   +A+ A
Sbjct: 722  KVLEIRGQAMPGGGFVSTFTDITAHIQAEKALQLANETLEKRVESRTRELAKAKAEAEAA 781

Query: 883  NMAKSRFLAVASHDLRQPLQTLTLLQGLLAKKVEGVQSRVLLARMDETLGAMSSMLNVLL 942
            N +K+RFLA ASHDL QP   LTL   +L ++V   + + L   ++ +L  + S+L+ L+
Sbjct: 782  NSSKTRFLAAASHDLMQPFNALTLFTEMLKQRVTSTELKDLATHIEASLNVVESLLSDLV 841

Query: 943  DINQIEVGTVEAERVVFPINDLFDRVREELAYQARAKKLDWSVVSCGLSVTSDPRLLEQM 1002
            +I++++  +++ E+  F +NDL   +  E    +  + +D+S       V SD RLL ++
Sbjct: 842  EISRLDSSSLKTEQSQFALNDLLSTLVNEFKVLSAEQGIDFSYQLSSCLVQSDQRLLRRI 901

Query: 1003 IRNLLANALKYTKQG--------------------------KVLLGCRRRSGSLSIEVWD 1036
            I+N L+NA  Y+  G                          KVLLG RR   SL I+VWD
Sbjct: 902  IQNFLSNAFHYSPAGAVNRQTPLSLNASAALPKLSQADFVPKVLLGVRRLEHSLLIQVWD 961

Query: 1037 SGIGIPPGELEAIFDEFHQVETPAQGQGRGLGLGLSIVRRLGDLLGHPIGVRSRLGKGSV 1096
            +G GIP  + +AIF EF ++E   +    GLGLGL+I  R+  LLG  I + S +GKG+ 
Sbjct: 962  NGPGIPQDKQQAIFGEFERLEQTREIP--GLGLGLAICDRIAKLLGLKIALHSEVGKGTC 1019

Query: 1097 FTINVAIAPAAAEKPSLPARRGAAEVKVDADGQRTG---EILIIEDDPDVRDLLDLLLKG 1153
            F++ V    A A KPS P+     +++ + +G        +L+I++D  +   +  LL G
Sbjct: 1020 FSVEVPRVFAQA-KPSNPS--NVVKLRSEEEGANDSFNISVLVIDNDELMLKAISSLLLG 1076

Query: 1154 EGHRTVAVAEGGQAVALAEGGSIRPDLILADYNLPNGVNGLGVSATLRDVLDRPI----- 1208
             G   +   +   A        + P LI+ADY+L +  NG+ +   ++ +L  P+     
Sbjct: 1077 WGCHVLTARDKASAEQQLT-QQVLPKLIIADYHLDDDQNGVDL---VQSLLTHPVFSSQR 1132

Query: 1209 -PVVILTGDISTRTLHDIARHRCVKLNKPVKPGELTQTIARL 1249
               +I + D S       +  +   + KPVK   L + I +L
Sbjct: 1133 PTCIICSADPSESVRQHTSSAQFSFVRKPVKATALKRLIKQL 1174