Pairwise Alignments

Query, 170 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 314 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.3 bits (142), Expect = 6e-14
 Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 11/150 (7%)

Query: 6   GGRSLEVLTLGLAG-EIFAIEASHVREILDLVPITEVPNSAAFVSGLINVRGKVVPLADL 64
           G   LE+L   +   ++FAI    V+E++ L P+  +P S   +SG+ N+RG  +P+ DL
Sbjct: 16  GENRLELLLFRINSMQLFAINVFKVKEVVKLPPLNAMPGSHPHISGVANIRGMSIPVIDL 75

Query: 65  RLKFGMEQKPPTIDTRIVVIEVLVDGDPLIVGIRADKVYEITQVAAGALEETPRIGMRWR 124
           R   G +  PP     +++ E     +  + G    KV  I  +    +   P+     R
Sbjct: 76  RSAIGFKPVPPDDTANMIITEY----NRSVQGFLVGKVEHIINMTWSDIMPPPKTA--GR 129

Query: 125 SDYITCIGKRD----ADFIVVLDIGRIFSQ 150
           ++Y+T I + D    +  + ++D+ ++ ++
Sbjct: 130 NNYLTAITRIDYQGQSQLVSIIDVEKVLAE 159