Pairwise Alignments

Query, 583 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 565 a.a., methyl-accepting chemotaxis protein from Azospirillum brasilense Sp245

 Score = 70.5 bits (171), Expect = 2e-16
 Identities = 106/487 (21%), Positives = 188/487 (38%), Gaps = 60/487 (12%)

Query: 11  AGAIRTASTSTEARFLEIGGGLETSVEILTSLTQTFATLSDALKGETLARATRELSQIAS 70
           AG  RT   ST     +    +E   + LT       T +D +KG++ A  T +  QI  
Sbjct: 68  AGLYRTVILSTANASPK---AVEDESKALTEQITKLKTQADKMKGQSAA--TEDEGQILQ 122

Query: 71  RVSSLAAAQNSEIESFVALTKL-------IATIESRVVRMGKSVRGVGILATNTKIAAAH 123
           R  S  AA  +++ SF+ L K+       +  +++   R+  + R            A  
Sbjct: 123 RFGSDTAAYQAKVTSFLDLLKMGVDPLDFLQEVQAAYGRLNGTARDYLTYQRQQSADAYA 182

Query: 124 IGDTGVDFTSFANEINRTLRLAQTSLDEFAGELAEVGRDLHVAINTQSVLEEQQTEAIRT 183
             +  VD T+ A   +  + L           L  VG  L +  N    +    T   R 
Sbjct: 183 NVNASVDATTQAFIASAIVAL-----------LITVGVALFIGFNIARPVVRLTTVMERL 231

Query: 184 IPRRLTRSIEAI--GARCKTAVSTAFAVGQGSQRIGRRIGDAVMALQIGDITRQRIEHAD 241
              RL   + A   G        T     + + R+        MA +   +  + +E   
Sbjct: 232 AQGRLEDEVPAAERGDEIGQMARTVRVFKENALRVQE------MAREQEAMRARAMEEQR 285

Query: 242 YALGLLAAPPASLEAD-EASHADVIDFFCQLQSRQLEDAADEFD--MEIGRILMSLEDLA 298
            A+  LAA    LEA  +A   +V+        R  +    E +  +E  R      D  
Sbjct: 286 RAMNSLAA---DLEASVKAMMGEVV--------RSADSMRGEANVMLENARQTSHHSDSV 334

Query: 299 LDAGEILRLGNDAFAASGDHQGTFLGELGKEVAAVDDLLGGFRAARTKADQIAASVSDAT 358
             A +      ++ AA  +     + E+ + +     L  G      + D I   +S+A+
Sbjct: 335 AHAVQEATSEVESVAAGAEQLRASIDEITRSITQSTQLARGAVDEAGRTDSIVQGLSEAS 394

Query: 359 TRLVSHIGTLRSLEADIRIMGLNTTLKCGRLGNAGKALGVIAQELRHYANEITTEASEVM 418
            ++   +G + ++     ++ LN T++  R G AGK   V+AQE++  AN+      E+ 
Sbjct: 395 RKIEEVVGLINNIAGQTNLLALNATIEAARAGEAGKGFAVVAQEVKSLANQTAKATDEIG 454

Query: 419 ADLDQVVSITKALSDEAHQDRASDIAAVSAIMADSLALLGQVGQSLASALASLEHDGHVV 478
           A++  V              +A+  AAV+AI A  +  + QV +SL++  A++E      
Sbjct: 455 AEIAAV--------------QAATTAAVNAIRA-IVNTIRQVDESLSTVAAAVEEQDAAT 499

Query: 479 ADLLEKT 485
            D+ E++
Sbjct: 500 RDISERS 506



 Score = 45.8 bits (107), Expect = 5e-09
 Identities = 56/238 (23%), Positives = 89/238 (37%), Gaps = 34/238 (14%)

Query: 8   DQIAGAIRTASTSTEARFLEIGGGLETSVEILTSLTQTFATLSDALKGETLARATRELSQ 67
           D +A A++ A++  E+    +  G E     +  +T++    +   +G     A  E  +
Sbjct: 332 DSVAHAVQEATSEVES----VAAGAEQLRASIDEITRSITQSTQLARG-----AVDEAGR 382

Query: 68  IASRVSSLAAAQNSEIESFVALTKLIATIESRVVRMGKSVRGVGILATNTKIAAAHIGDT 127
             S V  L+ A   +IE  V L   IA         G++     +LA N  I AA  G+ 
Sbjct: 383 TDSIVQGLSEASR-KIEEVVGLINNIA---------GQT----NLLALNATIEAARAGEA 428

Query: 128 GVDFTSFANEINRTLRLAQTSLDEFAGELAEVGRDLHVAINTQSVLEEQQTEAIRTIPRR 187
           G  F   A E+         + DE   E+A V      A+N           AIR I   
Sbjct: 429 GKGFAVVAQEVKSLANQTAKATDEIGAEIAAVQAATTAAVN-----------AIRAIVNT 477

Query: 188 LTRSIEAIGARCKTAVSTAFAVGQGSQRIGRRIGDAVMALQIGDITRQRIEHADYALG 245
           + +  E++            A    S+R  R   D V  LQ   + +Q  E   ++ G
Sbjct: 478 IRQVDESLSTVAAAVEEQDAATRDISERSQRAATDTVAVLQEMRLVQQAAETTGHSAG 535