Pairwise Alignments

Query, 583 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 446 a.a., Methyl-accepting chemotaxis protein (MCP) signalling domain from Sphingomonas koreensis DSMZ 15582

 Score = 57.8 bits (138), Expect = 9e-13
 Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 65/302 (21%)

Query: 264 VIDFFCQLQSRQLE------DAADEFDMEIGRILMSLE---DLALDAGEILRLGNDAFAA 314
           +ID   +L+S + E       A +E+D    R  ++ E    + +   +  R G    A 
Sbjct: 139 IIDLLFRLRSMECEIYTALYSAYNEYDARASRDQLAAEFRESIGITVEQATRDGEALRAQ 198

Query: 315 SGDHQGTFLGELGK--EVAAVDD---------------LLGGFRAARTKADQIAA----- 352
           +    G   G LGK  EVAA  +               L+     ART+ +  A      
Sbjct: 199 ATLTSGATRGMLGKASEVAAAAEQSAVAMREAAHTAAGLIRAIEDARTEVEAAAGIATRA 258

Query: 353 ------------SVSDATTRLVSHIGTLRSLEADIRIMGLNTTLKCGRLGNAGKALGVIA 400
                        +SD    + S +G +R +     ++ LN T++  R G+AG+   V+A
Sbjct: 259 SAQAGEAVAMSEMLSDHAKSIESILGLIRDIAGQTNLLALNATIEAARAGDAGRGFAVVA 318

Query: 401 QELRHYANEITTEASEVMADLDQVVSITKALSD------------EAHQDR---ASDIAA 445
           QE++  AN+      ++ A +  + S TK   D            +A  DR   A +I A
Sbjct: 319 QEVKSLANQTARATDDIAAKIAAIQSATKGTVDTNASIRDTVMEVQASADRIRTAMEIQA 378

Query: 446 --VSAIMA--DSLALLGQVGQSLASALASLEHDGHVVADLLEKTSARTAVHEEIAEVLRG 501
             V+AI A  D  AL      S+++ + ++  D   VA  +++     A  +     LR 
Sbjct: 379 QTVTAITAAVDETAL---AADSMSATIGAIREDTEAVASEIDRVGQGFAALDGQLGTLRN 435

Query: 502 AA 503
           +A
Sbjct: 436 SA 437



 Score = 42.0 bits (97), Expect = 5e-08
 Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 22/231 (9%)

Query: 27  EIGGGLETSVEILTSLTQTFATLSDALKGETLARATRELSQIASRVSSLAAAQNSEIESF 86
           E+    E S   +     T A L  A++        R   + A+ +++ A+AQ  E    
Sbjct: 215 EVAAAAEQSAVAMREAAHTAAGLIRAIED------ARTEVEAAAGIATRASAQAGEA--- 265

Query: 87  VALTKLIA----TIESRVVRMGKSVRG-VGILATNTKIAAAHIGDTGVDFTSFANEINRT 141
           VA++++++    +IES ++ + + + G   +LA N  I AA  GD G  F   A E+   
Sbjct: 266 VAMSEMLSDHAKSIES-ILGLIRDIAGQTNLLALNATIEAARAGDAGRGFAVVAQEVKSL 324

Query: 142 LRLAQTSLDEFAGELAEVGRDLHVAINTQSVLEEQQTEAIRTIPRRLTRSIEAIGARCKT 201
                 + D+ A ++A +       ++T + + +   E   +  R   R+   I A+  T
Sbjct: 325 ANQTARATDDIAAKIAAIQSATKGTVDTNASIRDTVMEVQASADR--IRTAMEIQAQTVT 382

Query: 202 AVS-----TAFAVGQGSQRIGRRIGDAVMALQIGDITRQRIEHADYALGLL 247
           A++     TA A    S  IG    D        D   Q     D  LG L
Sbjct: 383 AITAAVDETALAADSMSATIGAIREDTEAVASEIDRVGQGFAALDGQLGTL 433