Pairwise Alignments

Query, 583 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 454 a.a., Protoglobin/Methyl-accepting chemotaxis protein (MCP) signalling domain from Sphingomonas koreensis DSMZ 15582

 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 24/184 (13%)

Query: 341 RAARTKADQIAAS--VSDATTRLVSHIGTLRSLEADIRIMGLNTTLKCGRLGNAGKALGV 398
           RA+    + +A S  +SD    + S +G +R +     ++ LN T++  R G+AG+   V
Sbjct: 265 RASAQAGEAVAMSEMLSDHAKSIESILGLIRDIAGQTNLLALNATIEAARAGDAGRGFAV 324

Query: 399 IAQELRHYANEITTEASEVMADLDQVVSITKALSD------------EAHQDR---ASDI 443
           +AQE++  AN+      ++ A +  + S TK   D            +A  DR   A +I
Sbjct: 325 VAQEVKSLANQTARATDDIAAKIAAIQSATKGTVDTNASIRDTVMEVQASADRIRTAMEI 384

Query: 444 AA--VSAIMA--DSLALLGQVGQSLASALASLEHDGHVVADLLEKTSARTAVHEEIAEVL 499
            A  V+AI A  D  AL      S+++ + ++  D   VAD ++         +E    L
Sbjct: 385 QAQTVTAITAAVDETAL---AADSMSATIGAIREDTKSVADEIDTLQREFGEIDERLGQL 441

Query: 500 RGAA 503
           + AA
Sbjct: 442 KDAA 445



 Score = 48.5 bits (114), Expect = 6e-10
 Identities = 65/274 (23%), Positives = 113/274 (41%), Gaps = 26/274 (9%)

Query: 1   MQLRRTLD-QIAGAIRTASTSTEA---RFLEIGGGLETSVEILTSLTQTFATLSDALKGE 56
           ++L  TL  ++ G  R A+ ST     +  E+    E S   +     T A L  A++  
Sbjct: 193 IELTTTLGAKVRGQARGAADSTRGMLGKTSEVAAAAEQSAVAMREAAHTAAGLIRAIED- 251

Query: 57  TLARATRELSQIASRVSSLAAAQNSEIESFVALTKLIA----TIESRVVRMGKSVRG-VG 111
                 R   + A+ +++ A+AQ  E    VA++++++    +IES ++ + + + G   
Sbjct: 252 -----ARTEVEAAAGIATRASAQAGEA---VAMSEMLSDHAKSIES-ILGLIRDIAGQTN 302

Query: 112 ILATNTKIAAAHIGDTGVDFTSFANEINRTLRLAQTSLDEFAGELAEVGRDLHVAINTQS 171
           +LA N  I AA  GD G  F   A E+         + D+ A ++A +       ++T +
Sbjct: 303 LLALNATIEAARAGDAGRGFAVVAQEVKSLANQTARATDDIAAKIAAIQSATKGTVDTNA 362

Query: 172 VLEEQQTEAIRTIPRRLTRSIEAIGARCKTAVS-----TAFAVGQGSQRIGRRIGDAVMA 226
            + +   E   +  R   R+   I A+  TA++     TA A    S  IG    D    
Sbjct: 363 SIRDTVMEVQASADR--IRTAMEIQAQTVTAITAAVDETALAADSMSATIGAIREDTKSV 420

Query: 227 LQIGDITRQRIEHADYALGLLAAPPASLEADEAS 260
               D  ++     D  LG L     S  A  A+
Sbjct: 421 ADEIDTLQREFGEIDERLGQLKDAAGSFSASVAA 454