Pairwise Alignments

Query, 462 a.a., Nitrogenase (NCBI) from Rhodospirillum rubrum S1H

Subject, 462 a.a., nitrogenase molybdenum-cofactor synthesis protein NifN protein from Herbaspirillum seropedicae SmR1

 Score =  166 bits (421), Expect = 1e-45
 Identities = 129/464 (27%), Positives = 224/464 (48%), Gaps = 33/464 (7%)

Query: 5   LRKKERIGTINPIFTCQPAGAQYASIGIKDCIGIVHGGQGCVMFVRLLISQHLKESFEIA 64
           +    +   +NP+   QP GA YA +G+  C+ ++HG QGC  F  +L+ +H +E+  + 
Sbjct: 4   IETSSKAAAVNPLKMSQPLGAAYAFLGMNRCMPVMHGSQGCTSFGLVLLVRHFREAIPLQ 63

Query: 65  SSSVHEDGAVFGALDRVEQAV-DVLLMRYPDVKVIPIITTCSTEVIGDDVDGVVRKLEEG 123
           +++++E  ++ G ++ +E+AV ++ L   PD  +I I +T  TE  GDDV+  +R     
Sbjct: 64  TTAMNEVSSILGGMENIEKAVLNIRLRAKPD--LIAICSTGLTETKGDDVNAYLR----- 116

Query: 124 LLKEKFPD-REVHLIPIHTPSFVGSMVTGYDVAVRDFVKAFAKKGKPSL-----KINLIT 177
           L+++K PD  +  L  + TP + G+   G+  AV   ++A  +  +P L     +INL+ 
Sbjct: 117 LIRQKHPDLADTALAYVSTPDYTGAFQDGWAKAVEALIRALGEP-QPGLQTRAKQINLLA 175

Query: 178 G-WVNPGDVKELKHLLAEMRVEANVLFEIESFDSPLMPDK-SAVSHGSTTIDDLIDTANA 235
           G  + P D++EL+ ++    +E  VL ++ S     +PD  S  S G TT+ ++     +
Sbjct: 176 GCHLTPADIEELRDIVQSFGLEPIVLPDVSSSLDGHLPDNFSPTSMGGTTLAEMRALGAS 235

Query: 236 QGTIALNRYEGAKAAEFLQKGFDVPAVIGPTPIGIRNTDTFLQNLKIMTGKAIPPSLVRE 295
             +IA+     A +A+ +Q+   VP V+     G++  D FL  L+ ++G+ IP    R+
Sbjct: 236 IVSIAIGEQMRA-SAQAVQELSGVPYVVFDRLTGLQANDRFLAYLEYVSGQPIPARYRRQ 294

Query: 296 RGIAIDALTDLVHMFLADKKVAIYGNPDLVIGLAEFCLDLEMKPMLLLLGDENAGYETDP 355
           R    DA+ D  H F    KVAI   PDL++ L+ +  ++  +    +    +   +  P
Sbjct: 295 RSQLQDAMLD-GHFFFGGVKVAIGAEPDLLLSLSAWLAEMGCEIGCAVTTTTSPVLDGVP 353

Query: 356 RIKALQERVDHDMEIITNADLWELEDRVKNKGLELDLILGHSKGRFTAIDNNIPMVRVGF 415
             +            +   DL +LE   +       L++ HS GR  A   +IP  R G 
Sbjct: 354 AAR------------VVIGDLEDLEQGARR--ASAGLLVTHSHGRQAAERLHIPFHRAGL 399

Query: 416 PTYDRAGLYRHPVVGYAGATWLAEAMANTLFTDMEYKKNKEWIL 459
           P +DR G      VGY G   L   + N L          +W L
Sbjct: 400 PMFDRLGAGHCLSVGYRGTRGLIFEIGNLLLAAGHAHTPDDWQL 443