Pairwise Alignments

Query, 460 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 452 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  343 bits (881), Expect = 5e-99
 Identities = 203/453 (44%), Positives = 284/453 (62%), Gaps = 7/453 (1%)

Query: 7   TVLIVDDDEAIRQMLSAFLSKEGLRVVTARDGLEAIEVFRLQRTDVVLLDIRMPRMNGLE 66
           +VL+V+D+ ++   +   LS+ G  V TA D  +A ++ R +  D+V+ D+R+P MNG+E
Sbjct: 5   SVLLVEDELSMLLGMQHALSQAGYEVATAGDAEKAQQLLRQRPFDLVITDLRLPGMNGME 64

Query: 67  AAKAILEMDRGTAVILMTAFAEVCTAVQAIKDGAFDYVIKPFDLEEIRLLVRRALEIRSM 126
             + I E+  GT VIL+TAF EV  AVQAIK GAFD++ KPF  + + + V R      +
Sbjct: 65  LLEGICELYPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFPRDGLLIAVERYFRFLDL 124

Query: 127 RADIVSLRRELSERYGAEGILTDNPKMMDLRQTIAKVARSQATVLIQGESGTGKELVAAS 186
           + +   LR    ER   E  + ++P M+ + + I  +A S   VL+ G SG+GKELVA +
Sbjct: 125 KRENARLR---GERDDGE-FIGESPMMLKVFERIRAIAGSCVPVLVLGPSGSGKELVAGA 180

Query: 187 VHYGSPRATGPFIRVNCAAIPEGLLESEFFGHEKGAFTGAATRRRGRFEQAEHGTLFLDE 246
           +H  S R   PFI++NCAA+PE LLESE FGHEKGAFTGA   R+G+FE A+ GTLF DE
Sbjct: 181 LHRLSKRRDKPFIKINCAALPEHLLESELFGHEKGAFTGAQQARKGKFEAADGGTLFFDE 240

Query: 247 IGEISPALQVKLLRVLQEREYERVGGSEPIPADVRIVAATNRDLEAMIREGTFRQDLFFR 306
            GE+  A+Q KLLRVL+++E   VGG+ P   DVR V AT RDLE  I  GTFR+DL++R
Sbjct: 241 AGEMPLAVQAKLLRVLEDQEVTPVGGNMPRKVDVRTVFATARDLEEAIGAGTFREDLYYR 300

Query: 307 LNVVALKTIPLRDRPEDIRLLADHFLGRFAADNNVVIRGFDPAALDCMLAYPWPGNVREL 366
           +NVV +   PLR+R  D+ LLA+ FL RF A ++  +  F   A + +LAY +PGNVREL
Sbjct: 301 INVVPVTLPPLRERGGDVALLAERFLRRFCAQHDRQVT-FSEQARNALLAYDYPGNVREL 359

Query: 367 VNAVERAVVMSTGNVILRDDLPENIICGERAAFVSELLPDGEAIRPLREMASEFETRVIR 426
            NA+ERAV++   + I    LP+ I    +A+   E  P+      L +  ++FE + I 
Sbjct: 360 RNAIERAVILCAEDKIHVGHLPKRIRDATQAS--QEQQPEETRFVQLADGVAQFEKKRIL 417

Query: 427 LALARNGGNRARTAIQLGISRRALLYKLQEYAI 459
            AL + GG R R A  LGI+R+ L  KL+E  I
Sbjct: 418 EALQKTGGRRIRAAELLGITRKQLWLKLKELDI 450