Pairwise Alignments

Query, 460 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 469 a.a., nitrogen assimilation regulatory protein from Klebsiella michiganensis M5al

 Score =  327 bits (838), Expect = 5e-94
 Identities = 197/462 (42%), Positives = 265/462 (57%), Gaps = 19/462 (4%)

Query: 10  IVDDDEAIRQMLSAFLSKEGLRVVTARDGLEAIEVFRLQRTDVVLLDIRMPRMNGLEAAK 69
           IVDDD +IR +L   L+  GL   T   G E ++    +  DV+L DIRMP M+GL   K
Sbjct: 8   IVDDDSSIRWVLERALTGAGLSCTTFESGNEVLDALTTKTPDVLLSDIRMPGMDGLALLK 67

Query: 70  AILEMDRGTAVILMTAFAEVCTAVQAIKDGAFDYVIKPFDLEEIRLLVRRALEIRSMRAD 129
            I +      VI+MTA +++  AV A + GAFDY+ KPFD++E   LV RA+     +  
Sbjct: 68  QIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVDRAISHYQEQQQ 127

Query: 130 IVSLRRELSERYGAEGILTDNPKMMDLRQTIAKVARSQATVLIQGESGTGKELVAASVHY 189
                R          I+ + P M D+ + I +++RS  +VLI GESGTGKELVA ++H 
Sbjct: 128 ----PRNAPINSPTADIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHR 183

Query: 190 GSPRATGPFIRVNCAAIPEGLLESEFFGHEKGAFTGAATRRRGRFEQAEHGTLFLDEIGE 249
            SPRA  PFI +N AAIP+ L+ESE FGHEKGAFTGA T R+GRFEQA+ GTLFLDEIG+
Sbjct: 184 HSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQADGGTLFLDEIGD 243

Query: 250 ISPALQVKLLRVLQEREYERVGGSEPIPADVRIVAATNRDLEAMIREGTFRQDLFFRLNV 309
           +   +Q +LLRVL + ++ RVGG  P+  DVRI+AAT+++LE  ++EG FR+DLF RLNV
Sbjct: 244 MPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLELRVQEGKFREDLFHRLNV 303

Query: 310 VALKTIPLRDRPEDIRLLADHFLGRFAADNNVVIRGFDPAALDCMLAYPWPGNVRELVNA 369
           + +   PLR+R EDI  LA HFL   A +  V  +   P     +    WPGNVR+L N 
Sbjct: 304 IRVHLPPLRERREDIPRLARHFLQIAARELGVEAKQLHPETEMALTRLAWPGNVRQLENT 363

Query: 370 VERAVVMSTGNVILRDDLPENIICGERAAFVSELLPDG----------EAIRP-----LR 414
                VM+ G  +L  DLP  +         +++LPD            A+R      L 
Sbjct: 364 CRWLTVMAAGQEVLTQDLPSELFETAIPDNPTQMLPDSWATLLGQWADRALRSGHQNLLS 423

Query: 415 EMASEFETRVIRLALARNGGNRARTAIQLGISRRALLYKLQE 456
           E   E E  ++  AL    G++   A  LG  R  L  KL+E
Sbjct: 424 EAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKE 465