Pairwise Alignments

Query, 343 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  163 bits (413), Expect = 5e-45
 Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 14/311 (4%)

Query: 24  WLIGHPPVITLGLIVLVSLVVGAISPEFWQVSNLFDMARASVVSGLFGLGVLIVLATGGL 83
           WLI    +I L  +V+V   V  ++P F+ V NL ++ R + V+ +  +G+ +V+ T G+
Sbjct: 28  WLIEQKSLIALLFLVVV---VSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGI 84

Query: 84  DVSFTAIAALTMYVITKTVTDYAPGTPIAVILACGAAGGALIGALNGQLVHSLKAPSLIV 143
           D+S  ++ AL        V   A   P+ V +      GA +GA++G ++   K  + I 
Sbjct: 85  DLSVGSVLALCGAFAATLV---AMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIA 141

Query: 144 TIGTQYVIRGFLLTFI-GTGLFMNIPLSMEAFGKYELWRSEAGNGSIAILPAYVLVLVVV 202
           T+ T  ++RG  + +  G  +      + + F  +       G G    +P  V ++VVV
Sbjct: 142 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWF-------GTGYTLGIPVPVWLMVVV 194

Query: 203 SVVTWWILNRTLIGRAVYAVGGSPAIAERLGYNLRKVRVFAFMYAGLLAGIAGIIHVSSN 262
               W++LN T  GR VYAVGG+ +     G N+ +V++  +   GLLA +AGII  S  
Sbjct: 195 FAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRL 254

Query: 263 RLANPFDLAGSELDVIAAVVLGGARITGGSGSVVGTLLGVVLVTLINNVLILAGVPSTWQ 322
             A P    G ELD IAAVVLGG  + GG G ++GTL+G +++  +NN L L  V S +Q
Sbjct: 255 SSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQ 314

Query: 323 KVIVGIFIVLA 333
            +   + I+LA
Sbjct: 315 MIAKAVVILLA 325