Pairwise Alignments

Query, 596 a.a., Acyl-CoA dehydrogenase (NCBI) from Rhodospirillum rubrum S1H

Subject, 590 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N2E2

 Score =  580 bits (1494), Expect = e-170
 Identities = 303/590 (51%), Positives = 394/590 (66%), Gaps = 10/590 (1%)

Query: 1   MAGYKAPLRDMRYVLYDLFDGASL-TTLPGYEEFT-ADLIDPVLEEAAKICEDVLQPLNR 58
           M  + APLRDMR+VL+++F+  +L   LP       A   D +LEEAAK+   ++ PLNR
Sbjct: 1   MPEFNAPLRDMRFVLHEVFNAPNLWARLPALANTVDAATADAILEEAAKVTHHLIFPLNR 60

Query: 59  PGDEEGCVLENGVVRTPKGFPEAYRTFREGGWTSITCDPAHGGQGLPQVVNTFIEEMICA 118
            GDEEG    +G V TP GF  AY T+ +GGW  ++ +PA+GG G+P+++    EEM+ A
Sbjct: 61  SGDEEGAQWHDGQVSTPNGFKAAYSTYIDGGWVGLSGNPAYGGMGMPKMLAVQFEEMLYA 120

Query: 119 ANLSFGMYPGLSHGAYVALKQFGTEDQKARYLPALVDGTWTGTMCLTEPQCGTDLGLLRT 178
           AN SF +Y  LS GA +A+    +E  KA YLP + +G W G+MCLTE   GTDLG++RT
Sbjct: 121 ANSSFALYSALSSGACLAIDAHASEALKALYLPPMYEGRWAGSMCLTEAHAGTDLGIIRT 180

Query: 179 KAVPDGEGGYKITGTKIFISAGDHDLTENILHLVLARLPDAPKGIKGISLFLVPKVLVTE 238
           +A P  +G Y+ITG+KIFI+ G+ DLTENI+HLVLA+LPDAP G KGISLFLVPK+ V  
Sbjct: 181 RAEPQADGSYRITGSKIFITGGEQDLTENIIHLVLAKLPDAPAGPKGISLFLVPKIRVDA 240

Query: 239 EGALGDRNAVTCGALEHKMGIKASSTCVLNFDEATGWLIGEPHKGMRAMFAMMNTARLGV 298
           +G LG+ NAV+CG++EHKMGIKAS+TCV+NFD A+GWLIGE +KG+ AMF MMN  RL +
Sbjct: 241 QGMLGEANAVSCGSIEHKMGIKASATCVMNFDGASGWLIGEANKGLAAMFTMMNYERLSI 300

Query: 299 GVQGLGLAEASYQGAVAYARDRLQGRSPSGVKAPDKPADPLIVHPDVRRMLLTQRAIVEG 358
           G+QG+G AEASYQ A  YA++R+Q RSP+G +A DK ADP+IVHPDVRRMLL+ +A+ EG
Sbjct: 301 GIQGIGCAEASYQNARRYAQERIQSRSPAGAQAKDKIADPIIVHPDVRRMLLSMKAMTEG 360

Query: 359 GRALAAWVGLALDRQHHAGDPATRAEAGEFVALMTPVVKALLTDLGSEATNLGVQVFGGH 418
           GRA A +VG  LD       P  R +A   VAL+TPV KA  TD G ++   G QVFGGH
Sbjct: 361 GRAFACYVGQQLDLAKFCDHPQERLDAEALVALLTPVAKAFFTDTGLDSCIHGQQVFGGH 420

Query: 419 GYIREHGMEQYIRDCRITQIYEGTNGIQALDLVGRKLPENAGRNLRRFFHPVADYIEARL 478
           GYIRE G EQ +RD RI QIYEGTNGIQALDL+GRK+  N G  LR F   + D+  A L
Sbjct: 421 GYIREWGQEQLVRDVRIAQIYEGTNGIQALDLLGRKVVGNGGVALRLFTTQIRDF--AYL 478

Query: 479 DDDTLAEFVGPLAKTFVRLQQATAQVARVGMTKPAEAAAAATDYQRLLGFTALAYLWARM 538
                A +   L     RL+  +  + +     P    +A  +Y  L G+ A AY+WARM
Sbjct: 479 PG---AAYAAELLDAVQRLENLSDWLQQQASLDPHAIGSACVEYLHLFGYVAYAYMWARM 535

Query: 539 AELSLPKAGTAEDNDAFHSAKVATARVFMERLLPQTSGLFATIMAGGRSL 588
           A+ +  +  T   +  F+ AK+ TAR +  RLLP+   L  +I AG  SL
Sbjct: 536 AQTAEHQHAT---DPTFYGAKLGTARFYFSRLLPRILSLEQSIRAGSPSL 582