Pairwise Alignments

Query, 292 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

Subject, 264 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 12/233 (5%)

Query: 47  EDIKKAGVIKAATEMQFPPFDFL--EGDKYVGVDRDLMDEVAKELGVKVEYIDLPWTSVL 104
           ++++++GV+K      +PPF+    +  +  G D DL + + +ELG++VE +D  W ++L
Sbjct: 37  KNVEESGVLKVGLCAAWPPFESRNEKTGEIEGFDVDLANALGEELGIEVEIVDAEWQALL 96

Query: 105 PGLEAGKFDLVIAPVTITKERLARYAFTLPISEGTAALMKRADDDSITKPEDIAGKTIGG 164
            GL  G +D +I  ++  +  +     +    E    ++ R D++ I    D++GK +G 
Sbjct: 97  GGLSKGDYDTLITCMSKKEASVENVEMSEVYYELNDVIVVRNDNNEINNVSDLSGKIVG- 155

Query: 165 GKGTSQLGQIKEYAA-ALPGKVEFKEYVDSNQSYADLAAGRVDASVNSYPNLAYAAAQRP 223
                QLG   E A  AL G  E K Y  + ++  DL   R DA V  Y  +    ++ P
Sbjct: 156 ----VQLGSGSEQAVDALSGIKEIKRYNYNPEAMIDLQNNRSDAVVVGYTYVLSEISKYP 211

Query: 224 ETFAVVLPPFGKTTYFSWVSRLGEKDASLVEAVNAALLKLGEDGRMSAIHEKW 276
           +   +  P    +     V + G K+  L   +N AL K+ E+G+   I +KW
Sbjct: 212 DLKVLDTPI--ASAEIVMVQKEGAKE--LTVKLNEALSKIKENGKYDEIQDKW 260