Pairwise Alignments

Query, 632 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (325), Expect = 3e-34
 Identities = 95/285 (33%), Positives = 146/285 (51%), Gaps = 19/285 (6%)

Query: 342 MAARDAVVIIDQKGIISEFNPSATELFGYDVEEVRGQSVNMLMPATYARDHDGHLRKGKP 401
           M    AVVI D++  I + N   T L GY  E+V+G+  ++     +  +   +++  K 
Sbjct: 361 MDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEF--YMQMWKA 418

Query: 402 SGQRAIGRGREMIGRRKNGSEFPIELTVGTQSFDGTRV--HIGVIRDITERKATEETLRR 459
                +  G E+I +RK+G      L + +   +   +  ++    DI+ RKA E  LR 
Sbjct: 419 LQDNGVWEG-EVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRE 477

Query: 460 LANIDGLTGVLNRRSFTEESELLLSLANRHGRRLS--MMIVDADHFKGVNDTYGHDAGDR 517
           L+  D LT + NRR F +   L  +   R+  +    + I+D DHFK +ND +GH+ GD 
Sbjct: 478 LSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDL 537

Query: 518 VLKALTGEIAGVLRKTDLLGRIGGEEFAILLPETDQEGAEGLAWRVVLAIRALEVPLPEG 577
           VL+ +   I   LR++D + RIGGEEFAI+ P T  E AE +  RV L I +L       
Sbjct: 538 VLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVRLHIASLHHQ---- 593

Query: 578 GVLKVTVSVGVSCRNTEAATF-DWMLKEADTALYAAKHGGRDRVA 621
              +VT+S GV    T+  T  D   K AD ALY +K  GR++++
Sbjct: 594 ---QVTLSGGV----TDVCTSPDQSYKRADLALYESKTSGRNQIS 631