Pairwise Alignments

Query, 811 a.a., Primosomal protein n (NCBI) from Rhodospirillum rubrum S1H

Subject, 737 a.a., primosomal protein N' (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  387 bits (995), Expect = e-112
 Identities = 271/810 (33%), Positives = 382/810 (47%), Gaps = 100/810 (12%)

Query: 25  VAVLLPLPLAGAYDYKVPAG-------MARPAVGTLVRVPLGRREEIGVVWG-AGAGETP 76
           V V LP+P+   + Y+V           A+P +G  V+VP GR++ IG+V     + +  
Sbjct: 5   VEVALPVPMRQNFTYRVKTNEQNDDSPQAKPQIGVRVKVPFGRQQLIGLVTAITDSCDLA 64

Query: 77  PERLKPLIGF-PECPPLPAPLRAFIDWVAAYTVQPPGAVLRMALSVPA--ALEAPPPALG 133
           P +LK +I F  + P LP  L     W A Y     G +L  AL V     L+A P  + 
Sbjct: 65  PTQLKSVIEFIDDAPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAPQKIQ 124

Query: 134 -WRRPSAGQRAAGQRAEGQGPLPGGARLSPGRQRVLAVLDDHPGLPFAGADLAREAAVG- 191
            W+  + G   A          P   + +P ++++L  L            L +E  +  
Sbjct: 125 YWQITTIGSNIA----------PETLKRAPAQKKLLEHLKQ--------TSLTQEEVISL 166

Query: 192 ---PAVVAAMAKAGLL---EAVTRSN-EWSPQAPDADRPGPLLSADQQAAADGLRTALDQ 244
                 +  + + G +   E + + N +W  Q  + D     L+ +Q  A   L     Q
Sbjct: 167 ELNKTALKTLEEKGWIAQHEKIAQLNLDWRSQL-ELDETPHRLNKEQAVAVTVLTQ--QQ 223

Query: 245 GFSGLLLEGVTGSGKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQ 304
           G+   LLEG+TGSGKTEVY   +   L++G+QAL+L+PEI L  Q   RF  RF      
Sbjct: 224 GYHCTLLEGITGSGKTEVYLALLEHILKQGKQALILVPEIGLTPQTINRFKRRFRVNVAV 283

Query: 305 WHSQMGAAARRRAWRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEGVPY 364
            HS +    R  AWR    G+A +++G RSALF P    G+II+DEEHDS+FKQ+EGV Y
Sbjct: 284 LHSGLTDNQRLEAWRQARCGQAAIIIGTRSALFTPMAFPGVIILDEEHDSSFKQQEGVGY 343

Query: 365 NARDMAVVRARLGGFPAVLASATPSLETIENARQGRYRHLVLPRRHGGAEMPEITLLDLR 424
           +ARD+AV+R  L   P VL SATPSLE+++NA  GRY HL L  R G A+     ++D++
Sbjct: 344 HARDLAVMRGHLESIPVVLGSATPSLESLQNALSGRYHHLQLGERAGNAKKVRQGIIDIK 403

Query: 425 RAPPQKWLPTDFAGPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMARPARL 484
             P +              G++AP                                    
Sbjct: 404 NLPLK-------------AGMSAP------------------------------------ 414

Query: 485 GWLSPPLITAVEETLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHRRDGR 544
                 LI  +   L AG QVLLFLNRRG+AP  LC  CGH  +C RC A+   H+  G 
Sbjct: 415 ------LINEIRSHLDAGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGE 468

Query: 545 LRCHHCGYQQPIPETCPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTVTGPK 604
           +RCHHCG Q  IP  C  CG +  L   G G E+LAE     FPK  +     DT     
Sbjct: 469 IRCHHCGNQYAIPRQCHNCG-STMLMGQGIGTEQLAEALQLEFPKYPVVRIDRDTTRLKG 527

Query: 605 EAAALATRIANHDIDLIIGTQIMAKGHHFPLITLVGVVDGDLGLTGGDLRASERTHQLLH 664
              +  + I   +  +++GTQ++AKGHHFP +TLVG++D D  L   D RA ER  QL  
Sbjct: 528 SLESHLSAIHKGEYKILVGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYT 587

Query: 665 QVAGRAGRAERPGRVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPPFGRLVAL 724
           QVAGRAGRA + G VL+QT    +P++  L       F   +  ERQ   +PP   +V +
Sbjct: 588 QVAGRAGRANKLGTVLLQTHQSDNPILRDLLHRGYGEFARSQLKERQMALLPPAWHMVLV 647

Query: 725 VISGEDSARVQAVAAALGRAAPMGPGLDVLGPVPAPLAMLRGRHRHRLLLKAARGVKVQP 784
                 +        +     P     +++GP+PAPL    G+ R +L+ +A    ++Q 
Sbjct: 648 RAEAHSALDADNFLNSFASLLPQDKEFEIIGPMPAPLDRKAGKFRRQLMFQAKHRHRLQQ 707

Query: 785 VVRHWLSLVSIPPGVK---VQVDVDPISFL 811
                  LV   P  K     +D DP   L
Sbjct: 708 EFERIYPLVEQLPEAKRCRWSLDRDPQDLL 737