Pairwise Alignments

Query, 384 a.a., tRNA synthetase, class II (G, H, P and S) (NCBI) from Rhodospirillum rubrum S1H

Subject, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

 Score = 83.6 bits (205), Expect = 9e-21
 Identities = 84/323 (26%), Positives = 132/323 (40%), Gaps = 27/323 (8%)

Query: 14  PNGLRDVLPPDAAFEVATVERLVSVFAANGYERVKTPLIEFEEGLLTGASRATAGQTFRV 73
           P G RD LP +        ++L  VF +  +  + TP  E  E L          Q F  
Sbjct: 5   PKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 64

Query: 74  MDPITQRMMGLRADITIQVARLAASRLAKAPRPLRLTYSGQVLRVKGTQLRPERQFTQAG 133
            D    R MGLR ++T  VAR   +     P+P++L Y     R +  Q    R+F Q G
Sbjct: 65  RDH-GDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMG 123

Query: 134 IELIGAGGVDAIAESVLLTVEALAQAGLPRVTVDLNCPPLVPALCRALGLSEDLAGELRK 193
            ELIG+    A AE V + +E L +  +    + +    ++  +     LS+D   E+R+
Sbjct: 124 SELIGSKKPIADAEVVNMAIEGLKEINMD-FEIHIGHLGVLKGVFEKYNLSDDEGNEIRR 182

Query: 194 LLEQKDFTAAAALAGDAAGALSALSGTVGPAERALPVLAALDLPG--EAAGHRDALLALA 251
           L++++D     ++       LS L       E +  V   LDL G  E        LA  
Sbjct: 183 LIDKEDMDGLKSV-------LSRLESEKN-IEISKKVFEVLDLKGGKEVIPILKEKLADF 234

Query: 252 RKVMTAAPEVDVTVDPLEH---------KGFEYYTGCSFALFA--QGARGELGRGGEYPG 300
              + A   +D  ++ + H         +G +YYTG  F ++   +GA+   G GG Y  
Sbjct: 235 ESSVAALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAKQVCG-GGRYDN 293

Query: 301 DL---NGTVEPCCGATLYMDAVL 320
            +    G   P  G     D ++
Sbjct: 294 LIELFEGEPSPAVGFAYGFDRIM 316