Pairwise Alignments

Query, 640 a.a., Peptidase M41, FtsH (NCBI) from Rhodospirillum rubrum S1H

Subject, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

 Score = 61.6 bits (148), Expect = 8e-14
 Identities = 68/252 (26%), Positives = 106/252 (42%), Gaps = 44/252 (17%)

Query: 147 EKTGRVTFDDVAGIDEAKQELEEVVEFLRDPQKFQRLGGKIPKGVLLVGPPGTGKTLLAR 206
           EK    + +DVAG ++ KQ L E +E +        +GG+  K +LL GPPG+GKT LA 
Sbjct: 6   EKYRPKSLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAY 57

Query: 207 AIAGEANVPFFTISGS-----DFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGR 261
           AIA +       ++ S     D +   VG  A+       +       LI +DE+D +  
Sbjct: 58  AIANDYAFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL-- 109

Query: 262 HRGAGLGGGNDEREQTLNQLLVEMDGFEANEGVILIAATNRPDVLDPALLRPGRFDRQVT 321
                   GND+R      + V     +  E  +++ A    DV  PAL+        + 
Sbjct: 110 -------SGNDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLIN 155

Query: 322 VSNPDIMGREKILKVHMRKTPLGPDVDAKVIARGTPGFSGADLSNLVNEAALLAARKGKR 381
           V +        +L+    K   G ++D K+I +     SG DL   +N+   LA      
Sbjct: 156 VGSVHTNSIPPVLRRIALKE--GFEIDEKII-KMIASHSGGDLRAAINDLQSLATGGS-- 210

Query: 382 VVTMAEFEEAKD 393
                E E+AK+
Sbjct: 211 ----IEIEDAKE 218