Pairwise Alignments

Query, 279 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.3 bits (194), Expect = 7e-20
 Identities = 66/226 (29%), Positives = 98/226 (43%), Gaps = 41/226 (18%)

Query: 41  MQYRISELERLVQDLTGKVEQSLYENRQLQTKLENAQSDIDFRLNALESAGPAAAAPANS 100
           MQ R+  L++ V DL G  EQ  Y+  Q+Q +      +I   L++  +A PAA+ PA  
Sbjct: 53  MQRRLDTLQQEVLDLRGLTEQQNYQIEQMQQRQRQLYDEIA-NLSSKATATPAASVPA-- 109

Query: 101 VPSSARPTASAGAGKQGTPAPAEGVLGFPGKTAPAQGAASAARPAAAGALPAGSENDQYN 160
                            TPA                 A +A   AAA +L   SE   Y 
Sbjct: 110 -----------------TPA-----------------AVAATANAAASSL---SETASYE 132

Query: 161 YAFSL-LRNADYPAAEQAFKAFLDQHPKGSLAGNAQYWLGETYYVRGDYEQAAVAFMGGY 219
            A +L L+   Y  A  AF+AF+ Q+P    A NA YWLG+  + + ++ +A   F    
Sbjct: 133 SAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQVFNTVV 192

Query: 220 QSHPDSSKGPDNLLKLGLAMANLGKSKEACAAFGRLESQYPKAADA 265
               DS+K  D+L+KLG+     G    A   + ++   Y  +A A
Sbjct: 193 TRFSDSNKRGDSLVKLGMIAEKTGDKAGATQYYQQVVKDYANSAAA 238