Pairwise Alignments

Query, 166 a.a., Biopolymer transport protein ExbD/TolR (NCBI) from Rhodospirillum rubrum S1H

Subject, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

 Score = 65.5 bits (158), Expect = 3e-16
 Identities = 36/132 (27%), Positives = 73/132 (55%), Gaps = 2/132 (1%)

Query: 9   RGGRRKRSHQMSDINVTPMVDVMLVLLIIFMVTAPLLT-TGVKVDLPRTSAPSLDQDNQS 67
           R GRR    + + I++T M+D++ ++LI F+VT+  +  +GV+V+ P T+A ++ Q    
Sbjct: 2   RLGRRTSKQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEVNRP-TAAHAVSQKQAG 60

Query: 68  LTVSVGADGTLYVQDKVTDESELMARMQAITGVNPEARIYVRGDAGINYGRVMEVMGILR 127
           + V++ A   +Y+  +  D   + A ++ +    P+A + ++ D     G V++VM   +
Sbjct: 61  IFVAITAANDIYIDKRQVDVERVQATLEHLLLDQPDASLVIQADEHAFNGTVVKVMDAAK 120

Query: 128 SAGYTKVALVTQ 139
            AG   +AL  +
Sbjct: 121 GAGVKSIALAAE 132