Pairwise Alignments

Query, 308 a.a., MotA/TolQ/ExbB proton channel (NCBI) from Rhodospirillum rubrum S1H

Subject, 227 a.a., protein TolQ from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (425), Expect = 1e-46
 Identities = 93/221 (42%), Positives = 137/221 (61%), Gaps = 5/221 (2%)

Query: 86  LSAWSMFWQADIIVKMVMLSLVGASIWSWTIVFEKIVRLRDLNKKAEQFEEKFWSGGSLE 145
           +S   +F QA  +VKMVML+L+G S+ SW  + ++   +    ++A+ FE++FWSG  L 
Sbjct: 5   ISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDLG 64

Query: 146 DLFDRIGQRPRD--PMTAVFVAAMREWRHSAQRRNGAAGARAMLAQRVERVMGITQNREL 203
            L+  + +R  D   +  +F A   E+   A+ R    GA   + +   R M +   RE+
Sbjct: 65  ALYQDVKKRKDDIYGIEEIFYAGFTEF---ARLRKTNPGAPDFVMEGTGRAMRVAVAREV 121

Query: 204 ETLERRLGFLASTGAVAPFVGLFGTVWGIMNSFHAIGMSNDTSLATVAPGIAEALFATAL 263
           ++LE  L FLA+ G+++P++GLFGTVWGIM++F A+G     +LA VAPGIAEAL ATA+
Sbjct: 122 DSLETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAI 181

Query: 264 GLVAAIPAVIAYNKLSADIDRYAGRLEAFSGEFGAILGRQL 304
           GL AAIPAV+AYN+LS  + +       FS EF  IL RQ+
Sbjct: 182 GLFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHTILHRQV 222