Pairwise Alignments

Query, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

Subject, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

 Score =  405 bits (1041), Expect = e-118
 Identities = 196/315 (62%), Positives = 252/315 (80%)

Query: 18  EGEVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHGPPGLGKTTLAQIV 77
           E  +D A+RP+ LAD+ GQ   R+ + +F+QAA+ R EA+DH+L  GPPGLGKTTLA IV
Sbjct: 18  EEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIV 77

Query: 78  ARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAIEEVLYPAMEDFQL 137
           A E+GV  R TSGP++ KAGDLAA+LTNLE  DVLFIDEIHRL+P +EEVLYPAMED+QL
Sbjct: 78  ANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQL 137

Query: 138 DLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLDFYETDELVQIVTR 197
           D++IGEGPAARS++IDLPPFTL+GATTR+G LT+PLRDRFGI  RL++Y+  +L  IV R
Sbjct: 138 DIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQR 197

Query: 198 GSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPVDAFIADAALNRLE 257
            ++ LG+++  EGA EVARR+RGTPR+A RLLRRVRD+A V G   + A  AD ALN L+
Sbjct: 198 SAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRALNMLD 257

Query: 258 VDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIEPYLIQQGFIKRTP 317
           VD +G D MDR+ L  + + + GGPVG+D LAAA+ EE+DT+EDV+EP+LIQQG+++RTP
Sbjct: 258 VDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEPFLIQQGYLQRTP 317

Query: 318 RGRMLTAIAWTHLGL 332
           RGR+ T  A+ H G+
Sbjct: 318 RGRIATDRAYLHFGI 332