Pairwise Alignments

Query, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

Subject, 349 a.a., holliday junction ATP-dependent DNA helicase RuvB from Phaeobacter inhibens DSM 17395

 Score =  468 bits (1203), Expect = e-136
 Identities = 231/316 (73%), Positives = 265/316 (83%)

Query: 20  EVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHGPPGLGKTTLAQIVAR 79
           E D ALRPQ L +F+GQ + R NL VF+++AR RGEAMDH LFHGPPGLGKTTLAQIVAR
Sbjct: 26  ENDRALRPQGLGEFIGQAEARANLRVFIESARRRGEAMDHTLFHGPPGLGKTTLAQIVAR 85

Query: 80  ELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAIEEVLYPAMEDFQLDL 139
           ELGV FR TSGP++ KAGDLAAILTNLE RDVLFIDEIHRLNPA+EEVLYPAMEDF+LDL
Sbjct: 86  ELGVNFRMTSGPVLAKAGDLAAILTNLESRDVLFIDEIHRLNPAVEEVLYPAMEDFELDL 145

Query: 140 IIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLDFYETDELVQIVTRGS 199
           +IGEGPAAR+VRI+L PFTLVGATTR GLLTTPLRDRFGIP RL FY  DEL +IV+R +
Sbjct: 146 VIGEGPAARTVRIELQPFTLVGATTRMGLLTTPLRDRFGIPTRLQFYTVDELFEIVSRNA 205

Query: 200 RLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPVDAFIADAALNRLEVD 259
           R LG    D+GARE+ARR+RGTPR+AGRLLRRV DFA V G   +   +AD AL RL VD
Sbjct: 206 RKLGAPADDDGAREIARRARGTPRIAGRLLRRVVDFAVVEGDGTITRELADGALTRLGVD 265

Query: 260 GRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIEPYLIQQGFIKRTPRG 319
             GLD  DRRYL  +A++YGGGPVG++T++AAL+E RD +E+VIEPYL+QQG I+RTPRG
Sbjct: 266 QLGLDGADRRYLRMVAENYGGGPVGIETMSAALSESRDALEEVIEPYLLQQGLIQRTPRG 325

Query: 320 RMLTAIAWTHLGLTPP 335
           RML   AWTHLGLTPP
Sbjct: 326 RMLAHKAWTHLGLTPP 341