Pairwise Alignments

Query, 610 a.a., sodium/hydrogen exchanger (NCBI) from Rhodospirillum rubrum S1H

Subject, 599 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (274), Expect = 2e-28
 Identities = 109/407 (26%), Positives = 189/407 (46%), Gaps = 25/407 (6%)

Query: 8   LAILIGA-GLIGISVVTSLISFRVGAPLLLVFLGVGLLAGQDGIGGIVFNDS--GTAYF- 63
           +A+ I A G++G+      +++R+  P +L  L  G+LAG   + G++  ++  G   F 
Sbjct: 7   IALTIAAVGVVGLGC--QWLAWRLRLPAILFLLLAGILAGP--VFGVLNPEALMGDLLFP 62

Query: 64  IGSLALAVILFDSGFSTRLQTFRLAAAPSIVLATLGVALTTALVAIPSHSLLGLSWEESA 123
           + SLA+AVILF+   +   +  R  +     + T+G  ++  + +  +H LLG  W  + 
Sbjct: 63  LVSLAVAVILFEGSLTLNFKEIRGVSNTVWSIVTVGALVSWGITSTAAHWLLGFEWPLAL 122

Query: 124 LMGAVVGSTDAAAVFFLLRVGGILIRDRVRATLEVESSTNDPMAIFLTITLVELASAGGF 183
           + G++   T    +  LLR   +    R+   L  E    DP+     + + E   +   
Sbjct: 123 MFGSLTVVTGPTVIVPLLRT--VRPTARLANILRWEGILIDPLGALFVVMVYEFIVSSSH 180

Query: 184 SGEALSWGLGLAFVRQMGLGLLCGWIGGHLLVVGINRLRLEPALYPILGLALALFLFAAV 243
           +     + L L       +G   G   G  +   + R  L   L P   L++ L +FAA 
Sbjct: 181 AHSLEVFSLILL------VGFSIGIASGVAVAAVLRRGLLPEYLQPFAVLSVVLGVFAAS 234

Query: 244 SMVDG-SGFLAIYVAGMVMGNRKMRGGPALRRFQEALTWLAQMTMFLTLGLFASPSTFID 302
           + ++  SG L + V GM + N K      +  F+E LT L    +F+ L      + F  
Sbjct: 235 NALESESGLLTVTVMGMWLANAKGVNIQHILHFKEHLTILLITGLFILLAARIEVADF-- 292

Query: 303 VALPSVLIGLFLVF--VARPVAVWLCLLPFGYDRNETAFVAWVGLRG----AVSILLAIL 356
            AL    +GLF+V   +ARP ++++  L    +  E AF+AWV  RG    ++S L AI 
Sbjct: 293 QALGWSALGLFVVMQLLARPASIFISTLRSTLNVREKAFLAWVAPRGIVAASISSLFAIK 352

Query: 357 PIAAGLEHAQEMFNAAFIVVVTSLLLQGWTIRPMARWLGLVVPPRLG 403
            +  G+  A+ +    F+V++ +++LQ  T RPMA  L +  P   G
Sbjct: 353 LMEFGIADAKLLVPLTFMVIIGTVVLQSATARPMALALKVSEPAPKG 399