Pairwise Alignments

Query, 358 a.a., tRNA synthetase, class II (D, K and N) (NCBI) from Rhodospirillum rubrum S1H

Subject, 500 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Pseudomonas fluorescens FW300-N2E2

 Score =  166 bits (419), Expect = 2e-45
 Identities = 115/340 (33%), Positives = 175/340 (51%), Gaps = 28/340 (8%)

Query: 24  RARAAAAIRAFLGESGCIEVDTPALQISPGLEPHLRAFATTLEKPFDQGRATLR----LH 79
           R++  A IR+FL +   +EV+TP LQ  PG             KPF+     L     L 
Sbjct: 182 RSQVIAHIRSFLMKRDFLEVETPMLQTIPG---------GAAAKPFETHHNALDMEMFLR 232

Query: 80  TSPEFAMKKILAAGETAIFQLAHVFRNGERGPTHHPEFTMLEWYRSAMSYEALMAETEDL 139
            +PE  +K+++  G   +F++   FRN      H+PEFTMLE+Y++   YE  M  TE+L
Sbjct: 233 IAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEEL 292

Query: 140 VRAVARAT-GAERLVWGDAAADPFGPWERLSVAQALERYAGIDLLGALDAGVAISGNALE 198
            R +A+   G   + +GD       P+ RLSV  ++ +Y     L A D        A+ 
Sbjct: 293 FRELAQLVLGTTDVPYGDKVFHFGEPFVRLSVFDSILKYN--PELTADDLNDIEKARAIA 350

Query: 199 PDAGALAEAARAIGIACSPNDRFEDVFFRIVLDRVEHRLGHERPCILYDYPACMAALSRR 258
             AGA       +G       + + + F    + VEH+L  E+P  +  YP  ++ L+RR
Sbjct: 351 KKAGAKVLGFEGLG-------KLQVMIFE---ELVEHKL--EQPHFITQYPFEVSPLARR 398

Query: 259 KDDDPRLAERFEVYVGGLELANAFGELTDAAEQRARFTHDMDVKEALYGERYPIDGDFLE 318
            D++P + +RFE+++GG E+ANA+ EL DA +Q  RF   +  K+A   E    D DF+ 
Sbjct: 399 NDENPSVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVR 458

Query: 319 ALDQGLAPCSGIALGFDRLVMLCTGADAIDDVLWAPVADP 358
           AL+ G+ P +G  +G DRLVML T + +I DV+  P   P
Sbjct: 459 ALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMRP 498